Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Top1mtQ8R4U6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Top1mtQ8R4U6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Top1mtQ8R4U6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Top1mtQ8R4U6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Top1mtQ8R4U6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.48■■□□□ 1.83
Top1mtQ8R4U6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Top1mtQ8R4U6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Top1mtQ8R4U6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Top1mtQ8R4U6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
Top1mtQ8R4U6 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.47■■□□□ 1.83
Top1mtQ8R4U6 Gm11175-201ENSMUST00000116172 543 ntBASIC26.47■■□□□ 1.83
Top1mtQ8R4U6 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.47■■□□□ 1.83
Top1mtQ8R4U6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Top1mtQ8R4U6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Top1mtQ8R4U6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Top1mtQ8R4U6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Top1mtQ8R4U6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Top1mtQ8R4U6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.45■■□□□ 1.82
Top1mtQ8R4U6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.45■■□□□ 1.82
Top1mtQ8R4U6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.45■■□□□ 1.82
Top1mtQ8R4U6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Top1mtQ8R4U6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Top1mtQ8R4U6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
Top1mtQ8R4U6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Top1mtQ8R4U6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Top1mtQ8R4U6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Top1mtQ8R4U6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Top1mtQ8R4U6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Top1mtQ8R4U6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.42■■□□□ 1.82
Top1mtQ8R4U6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Top1mtQ8R4U6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Top1mtQ8R4U6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Top1mtQ8R4U6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Top1mtQ8R4U6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.41■■□□□ 1.82
Top1mtQ8R4U6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Top1mtQ8R4U6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Top1mtQ8R4U6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Top1mtQ8R4U6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Top1mtQ8R4U6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Top1mtQ8R4U6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Top1mtQ8R4U6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.39■■□□□ 1.82
Top1mtQ8R4U6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.39■■□□□ 1.82
Top1mtQ8R4U6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Top1mtQ8R4U6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Top1mtQ8R4U6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
Top1mtQ8R4U6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Top1mtQ8R4U6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Top1mtQ8R4U6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Top1mtQ8R4U6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Top1mtQ8R4U6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Top1mtQ8R4U6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Top1mtQ8R4U6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Top1mtQ8R4U6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Top1mtQ8R4U6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Top1mtQ8R4U6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Top1mtQ8R4U6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Top1mtQ8R4U6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Top1mtQ8R4U6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Top1mtQ8R4U6 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.35■■□□□ 1.81
Top1mtQ8R4U6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Top1mtQ8R4U6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Top1mtQ8R4U6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Top1mtQ8R4U6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Top1mtQ8R4U6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Top1mtQ8R4U6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Top1mtQ8R4U6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Top1mtQ8R4U6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Top1mtQ8R4U6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Top1mtQ8R4U6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Top1mtQ8R4U6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
Top1mtQ8R4U6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Top1mtQ8R4U6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Top1mtQ8R4U6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Top1mtQ8R4U6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Top1mtQ8R4U6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Top1mtQ8R4U6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Top1mtQ8R4U6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Top1mtQ8R4U6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Top1mtQ8R4U6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Top1mtQ8R4U6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Top1mtQ8R4U6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.29■■□□□ 1.8
Top1mtQ8R4U6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Top1mtQ8R4U6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Top1mtQ8R4U6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Top1mtQ8R4U6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Top1mtQ8R4U6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Top1mtQ8R4U6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Top1mtQ8R4U6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Top1mtQ8R4U6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Top1mtQ8R4U6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Top1mtQ8R4U6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Top1mtQ8R4U6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Top1mtQ8R4U6 Gm27502-201ENSMUST00000183495 199 ntBASIC26.27■■□□□ 1.8
Top1mtQ8R4U6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Top1mtQ8R4U6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Top1mtQ8R4U6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Top1mtQ8R4U6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Top1mtQ8R4U6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Top1mtQ8R4U6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms