Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r28Q8R2C9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r28Q8R2C9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r28Q8R2C9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Vmn1r28Q8R2C9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r28Q8R2C9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r28Q8R2C9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r28Q8R2C9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vmn1r28Q8R2C9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r28Q8R2C9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r28Q8R2C9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r28Q8R2C9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r28Q8R2C9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r28Q8R2C9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r28Q8R2C9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r28Q8R2C9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r28Q8R2C9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r28Q8R2C9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r28Q8R2C9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.27■□□□□ 0.84
Vmn1r28Q8R2C9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r28Q8R2C9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vmn1r28Q8R2C9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Vmn1r28Q8R2C9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.25■□□□□ 0.83
Vmn1r28Q8R2C9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r28Q8R2C9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r28Q8R2C9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r28Q8R2C9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r28Q8R2C9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r28Q8R2C9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r28Q8R2C9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r28Q8R2C9 Gm10420-201ENSMUST00000121713 882 ntBASIC20.23■□□□□ 0.83
Vmn1r28Q8R2C9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Vmn1r28Q8R2C9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Vmn1r28Q8R2C9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r28Q8R2C9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.22■□□□□ 0.83
Vmn1r28Q8R2C9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vmn1r28Q8R2C9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vmn1r28Q8R2C9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r28Q8R2C9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r28Q8R2C9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r28Q8R2C9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r28Q8R2C9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Vmn1r28Q8R2C9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vmn1r28Q8R2C9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r28Q8R2C9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Vmn1r28Q8R2C9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r28Q8R2C9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r28Q8R2C9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r28Q8R2C9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vmn1r28Q8R2C9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Vmn1r28Q8R2C9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r28Q8R2C9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vmn1r28Q8R2C9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r28Q8R2C9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r28Q8R2C9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r28Q8R2C9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vmn1r28Q8R2C9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r28Q8R2C9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Vmn1r28Q8R2C9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r28Q8R2C9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Vmn1r28Q8R2C9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Vmn1r28Q8R2C9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r28Q8R2C9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vmn1r28Q8R2C9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Vmn1r28Q8R2C9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Vmn1r28Q8R2C9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Vmn1r28Q8R2C9 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.16■□□□□ 0.82
Vmn1r28Q8R2C9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r28Q8R2C9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r28Q8R2C9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r28Q8R2C9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.15■□□□□ 0.82
Vmn1r28Q8R2C9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r28Q8R2C9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Vmn1r28Q8R2C9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vmn1r28Q8R2C9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vmn1r28Q8R2C9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r28Q8R2C9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r28Q8R2C9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r28Q8R2C9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r28Q8R2C9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms