Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim68Q8K243 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.85■■□□□ 1.41
Trim68Q8K243 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.85■■□□□ 1.41
Trim68Q8K243 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.85■■□□□ 1.41
Trim68Q8K243 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Trim68Q8K243 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Trim68Q8K243 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim68Q8K243 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Trim68Q8K243 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim68Q8K243 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim68Q8K243 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Trim68Q8K243 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.83■■□□□ 1.41
Trim68Q8K243 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.83■■□□□ 1.41
Trim68Q8K243 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Trim68Q8K243 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Trim68Q8K243 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim68Q8K243 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.81■■□□□ 1.4
Trim68Q8K243 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim68Q8K243 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.81■■□□□ 1.4
Trim68Q8K243 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim68Q8K243 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.8■■□□□ 1.4
Trim68Q8K243 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim68Q8K243 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim68Q8K243 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim68Q8K243 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim68Q8K243 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim68Q8K243 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim68Q8K243 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim68Q8K243 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim68Q8K243 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim68Q8K243 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Trim68Q8K243 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim68Q8K243 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.79■■□□□ 1.4
Trim68Q8K243 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Trim68Q8K243 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim68Q8K243 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim68Q8K243 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Trim68Q8K243 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim68Q8K243 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Trim68Q8K243 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim68Q8K243 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Trim68Q8K243 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim68Q8K243 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim68Q8K243 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim68Q8K243 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Trim68Q8K243 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Trim68Q8K243 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.77■■□□□ 1.4
Trim68Q8K243 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim68Q8K243 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim68Q8K243 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim68Q8K243 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim68Q8K243 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim68Q8K243 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim68Q8K243 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim68Q8K243 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim68Q8K243 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.74■■□□□ 1.39
Trim68Q8K243 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Trim68Q8K243 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.73■■□□□ 1.39
Trim68Q8K243 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.73■■□□□ 1.39
Trim68Q8K243 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
Trim68Q8K243 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Trim68Q8K243 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim68Q8K243 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim68Q8K243 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim68Q8K243 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim68Q8K243 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trim68Q8K243 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim68Q8K243 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim68Q8K243 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim68Q8K243 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim68Q8K243 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Trim68Q8K243 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trim68Q8K243 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.7■■□□□ 1.38
Trim68Q8K243 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.7■■□□□ 1.38
Trim68Q8K243 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.7■■□□□ 1.38
Trim68Q8K243 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim68Q8K243 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Trim68Q8K243 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.69■■□□□ 1.38
Trim68Q8K243 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim68Q8K243 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim68Q8K243 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
Trim68Q8K243 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim68Q8K243 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.68■■□□□ 1.38
Trim68Q8K243 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim68Q8K243 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Trim68Q8K243 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.67■■□□□ 1.38
Trim68Q8K243 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim68Q8K243 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim68Q8K243 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim68Q8K243 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim68Q8K243 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Trim68Q8K243 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim68Q8K243 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.66■■□□□ 1.38
Trim68Q8K243 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim68Q8K243 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim68Q8K243 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim68Q8K243 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim68Q8K243 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim68Q8K243 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim68Q8K243 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms