Protein–RNA interactions for Protein: Q8K0S9

Snapc1, snRNA-activating protein complex subunit 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc1Q8K0S9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snapc1Q8K0S9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snapc1Q8K0S9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snapc1Q8K0S9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snapc1Q8K0S9 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.24■□□□□ 0.99
Snapc1Q8K0S9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snapc1Q8K0S9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snapc1Q8K0S9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Snapc1Q8K0S9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Snapc1Q8K0S9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snapc1Q8K0S9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snapc1Q8K0S9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snapc1Q8K0S9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snapc1Q8K0S9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snapc1Q8K0S9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.23■□□□□ 0.99
Snapc1Q8K0S9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snapc1Q8K0S9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snapc1Q8K0S9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snapc1Q8K0S9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snapc1Q8K0S9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snapc1Q8K0S9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snapc1Q8K0S9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snapc1Q8K0S9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Snapc1Q8K0S9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
Snapc1Q8K0S9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.2■□□□□ 0.98
Snapc1Q8K0S9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snapc1Q8K0S9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snapc1Q8K0S9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Snapc1Q8K0S9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snapc1Q8K0S9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snapc1Q8K0S9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Snapc1Q8K0S9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Snapc1Q8K0S9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snapc1Q8K0S9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snapc1Q8K0S9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snapc1Q8K0S9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Snapc1Q8K0S9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snapc1Q8K0S9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snapc1Q8K0S9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snapc1Q8K0S9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snapc1Q8K0S9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Snapc1Q8K0S9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Snapc1Q8K0S9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snapc1Q8K0S9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Snapc1Q8K0S9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snapc1Q8K0S9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snapc1Q8K0S9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Snapc1Q8K0S9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Snapc1Q8K0S9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Snapc1Q8K0S9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snapc1Q8K0S9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snapc1Q8K0S9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
Snapc1Q8K0S9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Snapc1Q8K0S9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snapc1Q8K0S9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snapc1Q8K0S9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snapc1Q8K0S9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snapc1Q8K0S9 Gm37136-201ENSMUST00000194368 194 ntBASIC21.14■□□□□ 0.97
Snapc1Q8K0S9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Snapc1Q8K0S9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Snapc1Q8K0S9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Snapc1Q8K0S9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Snapc1Q8K0S9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Snapc1Q8K0S9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snapc1Q8K0S9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.13■□□□□ 0.97
Snapc1Q8K0S9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snapc1Q8K0S9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Snapc1Q8K0S9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Snapc1Q8K0S9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Snapc1Q8K0S9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Snapc1Q8K0S9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Snapc1Q8K0S9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Snapc1Q8K0S9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.1■□□□□ 0.97
Snapc1Q8K0S9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Snapc1Q8K0S9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Snapc1Q8K0S9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Snapc1Q8K0S9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Snapc1Q8K0S9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms