Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zc3h3Q8CHP0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zc3h3Q8CHP0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zc3h3Q8CHP0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zc3h3Q8CHP0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zc3h3Q8CHP0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zc3h3Q8CHP0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Zc3h3Q8CHP0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Zc3h3Q8CHP0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zc3h3Q8CHP0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.23■■□□□ 1.15
Zc3h3Q8CHP0 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.23■■□□□ 1.15
Zc3h3Q8CHP0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Zc3h3Q8CHP0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Zc3h3Q8CHP0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Zc3h3Q8CHP0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Zc3h3Q8CHP0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Zc3h3Q8CHP0 Gm12821-201ENSMUST00000120022 600 ntBASIC22.21■■□□□ 1.15
Zc3h3Q8CHP0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Zc3h3Q8CHP0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Zc3h3Q8CHP0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Zc3h3Q8CHP0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Zc3h3Q8CHP0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Zc3h3Q8CHP0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.2■■□□□ 1.14
Zc3h3Q8CHP0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Zc3h3Q8CHP0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Zc3h3Q8CHP0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Zc3h3Q8CHP0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Zc3h3Q8CHP0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Zc3h3Q8CHP0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.19■■□□□ 1.14
Zc3h3Q8CHP0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
Zc3h3Q8CHP0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Zc3h3Q8CHP0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Zc3h3Q8CHP0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Zc3h3Q8CHP0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.18■■□□□ 1.14
Zc3h3Q8CHP0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.18■■□□□ 1.14
Zc3h3Q8CHP0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.17■■□□□ 1.14
Zc3h3Q8CHP0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.17■■□□□ 1.14
Zc3h3Q8CHP0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Zc3h3Q8CHP0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.17■■□□□ 1.14
Zc3h3Q8CHP0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.17■■□□□ 1.14
Zc3h3Q8CHP0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Zc3h3Q8CHP0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.16■■□□□ 1.14
Zc3h3Q8CHP0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Zc3h3Q8CHP0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Zc3h3Q8CHP0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.16■■□□□ 1.14
Zc3h3Q8CHP0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Zc3h3Q8CHP0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.15■■□□□ 1.14
Zc3h3Q8CHP0 Gm12922-201ENSMUST00000120626 809 ntBASIC22.15■■□□□ 1.14
Zc3h3Q8CHP0 Gm27454-201ENSMUST00000185090 204 ntBASIC22.15■■□□□ 1.14
Zc3h3Q8CHP0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Zc3h3Q8CHP0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Zc3h3Q8CHP0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Zc3h3Q8CHP0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.14■■□□□ 1.13
Zc3h3Q8CHP0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Zc3h3Q8CHP0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Zc3h3Q8CHP0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.13■■□□□ 1.13
Zc3h3Q8CHP0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Zc3h3Q8CHP0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.13■■□□□ 1.13
Zc3h3Q8CHP0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Zc3h3Q8CHP0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Zc3h3Q8CHP0 Gm45417-201ENSMUST00000209533 758 ntBASIC22.13■■□□□ 1.13
Zc3h3Q8CHP0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Zc3h3Q8CHP0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Zc3h3Q8CHP0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Zc3h3Q8CHP0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Zc3h3Q8CHP0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.11■■□□□ 1.13
Zc3h3Q8CHP0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Zc3h3Q8CHP0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Zc3h3Q8CHP0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Zc3h3Q8CHP0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Zc3h3Q8CHP0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Zc3h3Q8CHP0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Zc3h3Q8CHP0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Zc3h3Q8CHP0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Zc3h3Q8CHP0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h3Q8CHP0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h3Q8CHP0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.09■■□□□ 1.13
Zc3h3Q8CHP0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h3Q8CHP0 Gm40881-201ENSMUST00000223397 166 ntBASIC22.09■■□□□ 1.13
Zc3h3Q8CHP0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Zc3h3Q8CHP0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Zc3h3Q8CHP0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Zc3h3Q8CHP0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Zc3h3Q8CHP0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.08■■□□□ 1.13
Zc3h3Q8CHP0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.12
Zc3h3Q8CHP0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Zc3h3Q8CHP0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Zc3h3Q8CHP0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.06■■□□□ 1.12
Zc3h3Q8CHP0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Zc3h3Q8CHP0 Zxda-201ENSMUST00000117281 2621 ntBASIC22.06■■□□□ 1.12
Zc3h3Q8CHP0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zc3h3Q8CHP0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
Zc3h3Q8CHP0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zc3h3Q8CHP0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Zc3h3Q8CHP0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zc3h3Q8CHP0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zc3h3Q8CHP0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zc3h3Q8CHP0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zc3h3Q8CHP0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Zc3h3Q8CHP0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms