Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Aph1aQ8BVF7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Aph1aQ8BVF7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Aph1aQ8BVF7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Aph1aQ8BVF7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.49■□□□□ 0.71
Aph1aQ8BVF7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Aph1aQ8BVF7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Aph1aQ8BVF7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Aph1aQ8BVF7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Aph1aQ8BVF7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Aph1aQ8BVF7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Aph1aQ8BVF7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Aph1aQ8BVF7 Gm10420-201ENSMUST00000121713 882 ntBASIC19.48■□□□□ 0.71
Aph1aQ8BVF7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Aph1aQ8BVF7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Aph1aQ8BVF7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.46■□□□□ 0.71
Aph1aQ8BVF7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aph1aQ8BVF7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.46■□□□□ 0.71
Aph1aQ8BVF7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aph1aQ8BVF7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aph1aQ8BVF7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Aph1aQ8BVF7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Aph1aQ8BVF7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Aph1aQ8BVF7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Aph1aQ8BVF7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Aph1aQ8BVF7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Aph1aQ8BVF7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Aph1aQ8BVF7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Aph1aQ8BVF7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Aph1aQ8BVF7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aph1aQ8BVF7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Aph1aQ8BVF7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Aph1aQ8BVF7 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.44■□□□□ 0.7
Aph1aQ8BVF7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Aph1aQ8BVF7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Aph1aQ8BVF7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Aph1aQ8BVF7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Aph1aQ8BVF7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Aph1aQ8BVF7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Aph1aQ8BVF7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Aph1aQ8BVF7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Aph1aQ8BVF7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.41■□□□□ 0.7
Aph1aQ8BVF7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Aph1aQ8BVF7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Aph1aQ8BVF7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Aph1aQ8BVF7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Aph1aQ8BVF7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Aph1aQ8BVF7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Aph1aQ8BVF7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.4■□□□□ 0.7
Aph1aQ8BVF7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Aph1aQ8BVF7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Aph1aQ8BVF7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Aph1aQ8BVF7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Aph1aQ8BVF7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.39■□□□□ 0.69
Aph1aQ8BVF7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Aph1aQ8BVF7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Aph1aQ8BVF7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Aph1aQ8BVF7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Aph1aQ8BVF7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Aph1aQ8BVF7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Aph1aQ8BVF7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Aph1aQ8BVF7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Aph1aQ8BVF7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.38■□□□□ 0.69
Aph1aQ8BVF7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Aph1aQ8BVF7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Aph1aQ8BVF7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Aph1aQ8BVF7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Aph1aQ8BVF7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Aph1aQ8BVF7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Aph1aQ8BVF7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Aph1aQ8BVF7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Aph1aQ8BVF7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Aph1aQ8BVF7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Aph1aQ8BVF7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Aph1aQ8BVF7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Aph1aQ8BVF7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Aph1aQ8BVF7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.36■□□□□ 0.69
Aph1aQ8BVF7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Aph1aQ8BVF7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Aph1aQ8BVF7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Aph1aQ8BVF7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Aph1aQ8BVF7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Aph1aQ8BVF7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Aph1aQ8BVF7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Aph1aQ8BVF7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Aph1aQ8BVF7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Aph1aQ8BVF7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Aph1aQ8BVF7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aph1aQ8BVF7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aph1aQ8BVF7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Aph1aQ8BVF7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Aph1aQ8BVF7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Aph1aQ8BVF7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aph1aQ8BVF7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aph1aQ8BVF7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Aph1aQ8BVF7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aph1aQ8BVF7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Aph1aQ8BVF7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Aph1aQ8BVF7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Aph1aQ8BVF7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms