Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cpsf4Q8BQZ5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf4Q8BQZ5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cpsf4Q8BQZ5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf4Q8BQZ5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf4Q8BQZ5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Cpsf4Q8BQZ5 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.27■■□□□ 1
Cpsf4Q8BQZ5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf4Q8BQZ5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cpsf4Q8BQZ5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf4Q8BQZ5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cpsf4Q8BQZ5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Cpsf4Q8BQZ5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf4Q8BQZ5 Terc-201ENSMUST00000082862 423 ntBASIC21.26■□□□□ 0.99
Cpsf4Q8BQZ5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf4Q8BQZ5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf4Q8BQZ5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf4Q8BQZ5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf4Q8BQZ5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf4Q8BQZ5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf4Q8BQZ5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Cpsf4Q8BQZ5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cpsf4Q8BQZ5 Gm27502-201ENSMUST00000183495 199 ntBASIC21.24■□□□□ 0.99
Cpsf4Q8BQZ5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf4Q8BQZ5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf4Q8BQZ5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf4Q8BQZ5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf4Q8BQZ5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf4Q8BQZ5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cpsf4Q8BQZ5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf4Q8BQZ5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf4Q8BQZ5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.23■□□□□ 0.99
Cpsf4Q8BQZ5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.23■□□□□ 0.99
Cpsf4Q8BQZ5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.23■□□□□ 0.99
Cpsf4Q8BQZ5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf4Q8BQZ5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.22■□□□□ 0.99
Cpsf4Q8BQZ5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.22■□□□□ 0.99
Cpsf4Q8BQZ5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf4Q8BQZ5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf4Q8BQZ5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Cpsf4Q8BQZ5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Cpsf4Q8BQZ5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf4Q8BQZ5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cpsf4Q8BQZ5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.21■□□□□ 0.99
Cpsf4Q8BQZ5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf4Q8BQZ5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf4Q8BQZ5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.21■□□□□ 0.99
Cpsf4Q8BQZ5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf4Q8BQZ5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf4Q8BQZ5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf4Q8BQZ5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Cpsf4Q8BQZ5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.99
Cpsf4Q8BQZ5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf4Q8BQZ5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf4Q8BQZ5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
Cpsf4Q8BQZ5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.2■□□□□ 0.98
Cpsf4Q8BQZ5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf4Q8BQZ5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Cpsf4Q8BQZ5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf4Q8BQZ5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf4Q8BQZ5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf4Q8BQZ5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf4Q8BQZ5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf4Q8BQZ5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Cpsf4Q8BQZ5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf4Q8BQZ5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf4Q8BQZ5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Gm12366-201ENSMUST00000121722 873 ntBASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Gm5786-201ENSMUST00000085368 882 ntBASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf4Q8BQZ5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf4Q8BQZ5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf4Q8BQZ5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.17■□□□□ 0.98
Cpsf4Q8BQZ5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf4Q8BQZ5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cpsf4Q8BQZ5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf4Q8BQZ5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf4Q8BQZ5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf4Q8BQZ5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 149.1 ms