Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Gm45855-201ENSMUST00000212546 880 ntBASIC17.17■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav15-1-dv6-1Q5R1D2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.13■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.1■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trav15-1-dv6-1Q5R1D2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.08■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.05■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Trav15-1-dv6-1Q5R1D2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms