Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cdkl5Q3UTQ8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cdkl5Q3UTQ8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Cdkl5Q3UTQ8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cdkl5Q3UTQ8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.61■■□□□ 1.69
Cdkl5Q3UTQ8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.61■■□□□ 1.69
Cdkl5Q3UTQ8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cdkl5Q3UTQ8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Cdkl5Q3UTQ8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cdkl5Q3UTQ8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC25.6■■□□□ 1.69
Cdkl5Q3UTQ8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cdkl5Q3UTQ8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cdkl5Q3UTQ8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cdkl5Q3UTQ8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Cdkl5Q3UTQ8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Cdkl5Q3UTQ8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cdkl5Q3UTQ8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Cdkl5Q3UTQ8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cdkl5Q3UTQ8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.58■■□□□ 1.69
Cdkl5Q3UTQ8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cdkl5Q3UTQ8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cdkl5Q3UTQ8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Cdkl5Q3UTQ8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdkl5Q3UTQ8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdkl5Q3UTQ8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Cdkl5Q3UTQ8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.57■■□□□ 1.68
Cdkl5Q3UTQ8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.57■■□□□ 1.68
Cdkl5Q3UTQ8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.57■■□□□ 1.68
Cdkl5Q3UTQ8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Cdkl5Q3UTQ8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdkl5Q3UTQ8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdkl5Q3UTQ8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdkl5Q3UTQ8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cdkl5Q3UTQ8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cdkl5Q3UTQ8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC25.56■■□□□ 1.68
Cdkl5Q3UTQ8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cdkl5Q3UTQ8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.55■■□□□ 1.68
Cdkl5Q3UTQ8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cdkl5Q3UTQ8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cdkl5Q3UTQ8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cdkl5Q3UTQ8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Cdkl5Q3UTQ8 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.53■■□□□ 1.68
Cdkl5Q3UTQ8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cdkl5Q3UTQ8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Cdkl5Q3UTQ8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdkl5Q3UTQ8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdkl5Q3UTQ8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.52■■□□□ 1.68
Cdkl5Q3UTQ8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdkl5Q3UTQ8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.51■■□□□ 1.67
Cdkl5Q3UTQ8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cdkl5Q3UTQ8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Cdkl5Q3UTQ8 Gm11175-201ENSMUST00000116172 543 ntBASIC25.51■■□□□ 1.67
Cdkl5Q3UTQ8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cdkl5Q3UTQ8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cdkl5Q3UTQ8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdkl5Q3UTQ8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdkl5Q3UTQ8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Cdkl5Q3UTQ8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Cdkl5Q3UTQ8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdkl5Q3UTQ8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdkl5Q3UTQ8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdkl5Q3UTQ8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdkl5Q3UTQ8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdkl5Q3UTQ8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cdkl5Q3UTQ8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cdkl5Q3UTQ8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cdkl5Q3UTQ8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Cdkl5Q3UTQ8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Cdkl5Q3UTQ8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Cdkl5Q3UTQ8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cdkl5Q3UTQ8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Cdkl5Q3UTQ8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cdkl5Q3UTQ8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Cdkl5Q3UTQ8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Cdkl5Q3UTQ8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cdkl5Q3UTQ8 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.47■■□□□ 1.67
Cdkl5Q3UTQ8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Cdkl5Q3UTQ8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cdkl5Q3UTQ8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC25.46■■□□□ 1.67
Cdkl5Q3UTQ8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cdkl5Q3UTQ8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cdkl5Q3UTQ8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cdkl5Q3UTQ8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.67
Cdkl5Q3UTQ8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
Cdkl5Q3UTQ8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cdkl5Q3UTQ8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Cdkl5Q3UTQ8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.45■■□□□ 1.66
Cdkl5Q3UTQ8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Cdkl5Q3UTQ8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.44■■□□□ 1.66
Cdkl5Q3UTQ8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cdkl5Q3UTQ8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cdkl5Q3UTQ8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cdkl5Q3UTQ8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cdkl5Q3UTQ8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cdkl5Q3UTQ8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Cdkl5Q3UTQ8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Cdkl5Q3UTQ8 Gm22567-201ENSMUST00000175542 342 ntBASIC25.42■■□□□ 1.66
Cdkl5Q3UTQ8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Cdkl5Q3UTQ8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cdkl5Q3UTQ8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms