Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc190Q3URK1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc190Q3URK1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc190Q3URK1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.32■□□□□ 0.68
Ccdc190Q3URK1 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.32■□□□□ 0.68
Ccdc190Q3URK1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc190Q3URK1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc190Q3URK1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc190Q3URK1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc190Q3URK1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc190Q3URK1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc190Q3URK1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc190Q3URK1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc190Q3URK1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc190Q3URK1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc190Q3URK1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc190Q3URK1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc190Q3URK1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc190Q3URK1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc190Q3URK1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc190Q3URK1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc190Q3URK1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc190Q3URK1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc190Q3URK1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc190Q3URK1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc190Q3URK1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc190Q3URK1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc190Q3URK1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc190Q3URK1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc190Q3URK1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc190Q3URK1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc190Q3URK1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc190Q3URK1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc190Q3URK1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc190Q3URK1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc190Q3URK1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Ccdc190Q3URK1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc190Q3URK1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc190Q3URK1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Ccdc190Q3URK1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc190Q3URK1 Gm8503-201ENSMUST00000118131 455 ntBASIC19.26■□□□□ 0.67
Ccdc190Q3URK1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.26■□□□□ 0.67
Ccdc190Q3URK1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc190Q3URK1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc190Q3URK1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc190Q3URK1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccdc190Q3URK1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc190Q3URK1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.25■□□□□ 0.67
Ccdc190Q3URK1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc190Q3URK1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc190Q3URK1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc190Q3URK1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc190Q3URK1 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.22■□□□□ 0.67
Ccdc190Q3URK1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc190Q3URK1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc190Q3URK1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc190Q3URK1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc190Q3URK1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc190Q3URK1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc190Q3URK1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc190Q3URK1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc190Q3URK1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc190Q3URK1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc190Q3URK1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc190Q3URK1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc190Q3URK1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc190Q3URK1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc190Q3URK1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc190Q3URK1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc190Q3URK1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ccdc190Q3URK1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc190Q3URK1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc190Q3URK1 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.19■□□□□ 0.66
Ccdc190Q3URK1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ccdc190Q3URK1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc190Q3URK1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc190Q3URK1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc190Q3URK1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc190Q3URK1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc190Q3URK1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc190Q3URK1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc190Q3URK1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc190Q3URK1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc190Q3URK1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc190Q3URK1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc190Q3URK1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc190Q3URK1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc190Q3URK1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc190Q3URK1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc190Q3URK1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms