Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim63Q38HM4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim63Q38HM4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim63Q38HM4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim63Q38HM4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim63Q38HM4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim63Q38HM4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Trim63Q38HM4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Trim63Q38HM4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim63Q38HM4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim63Q38HM4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim63Q38HM4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim63Q38HM4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim63Q38HM4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim63Q38HM4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim63Q38HM4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim63Q38HM4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim63Q38HM4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim63Q38HM4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim63Q38HM4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim63Q38HM4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim63Q38HM4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim63Q38HM4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.33■□□□□ 0.53
Trim63Q38HM4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim63Q38HM4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim63Q38HM4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim63Q38HM4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim63Q38HM4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim63Q38HM4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim63Q38HM4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim63Q38HM4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim63Q38HM4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim63Q38HM4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim63Q38HM4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim63Q38HM4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim63Q38HM4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim63Q38HM4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim63Q38HM4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim63Q38HM4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim63Q38HM4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim63Q38HM4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim63Q38HM4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim63Q38HM4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim63Q38HM4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim63Q38HM4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim63Q38HM4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim63Q38HM4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim63Q38HM4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim63Q38HM4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim63Q38HM4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Trim63Q38HM4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.28■□□□□ 0.52
Trim63Q38HM4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim63Q38HM4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim63Q38HM4 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.28■□□□□ 0.52
Trim63Q38HM4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim63Q38HM4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim63Q38HM4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim63Q38HM4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim63Q38HM4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim63Q38HM4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim63Q38HM4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.27■□□□□ 0.52
Trim63Q38HM4 Gm25238-201ENSMUST00000174914 89 ntBASIC18.27■□□□□ 0.52
Trim63Q38HM4 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.27■□□□□ 0.52
Trim63Q38HM4 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.27■□□□□ 0.52
Trim63Q38HM4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.27■□□□□ 0.51
Trim63Q38HM4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim63Q38HM4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim63Q38HM4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim63Q38HM4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim63Q38HM4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim63Q38HM4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim63Q38HM4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim63Q38HM4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Trim63Q38HM4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim63Q38HM4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim63Q38HM4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim63Q38HM4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim63Q38HM4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim63Q38HM4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim63Q38HM4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim63Q38HM4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim63Q38HM4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim63Q38HM4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim63Q38HM4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim63Q38HM4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim63Q38HM4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim63Q38HM4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim63Q38HM4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim63Q38HM4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim63Q38HM4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trim63Q38HM4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim63Q38HM4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim63Q38HM4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim63Q38HM4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim63Q38HM4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim63Q38HM4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim63Q38HM4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim63Q38HM4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim63Q38HM4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim63Q38HM4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms