Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm5131-201ENSMUST00000212776 1238 ntBASIC32.8■■■□□ 2.84
Xrn1P97789 Gm7199-201ENSMUST00000118327 1485 ntBASIC32.79■■■□□ 2.84
Xrn1P97789 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC32.79■■■□□ 2.84
Xrn1P97789 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC32.79■■■□□ 2.84
Xrn1P97789 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Xrn1P97789 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Xrn1P97789 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Xrn1P97789 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Xrn1P97789 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Xrn1P97789 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Xrn1P97789 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Xrn1P97789 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC32.76■■■□□ 2.83
Xrn1P97789 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.75■■■□□ 2.83
Xrn1P97789 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Xrn1P97789 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC32.75■■■□□ 2.83
Xrn1P97789 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC32.75■■■□□ 2.83
Xrn1P97789 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
Xrn1P97789 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC32.75■■■□□ 2.83
Xrn1P97789 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Xrn1P97789 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Xrn1P97789 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
Xrn1P97789 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Xrn1P97789 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Xrn1P97789 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC32.73■■■□□ 2.83
Xrn1P97789 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Xrn1P97789 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Xrn1P97789 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Xrn1P97789 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Xrn1P97789 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC32.72■■■□□ 2.83
Xrn1P97789 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Xrn1P97789 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC32.71■■■□□ 2.83
Xrn1P97789 AC164433.2-201ENSMUST00000226346 1701 ntBASIC32.7■■■□□ 2.83
Xrn1P97789 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Xrn1P97789 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC32.69■■■□□ 2.82
Xrn1P97789 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC32.68■■■□□ 2.82
Xrn1P97789 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Xrn1P97789 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Xrn1P97789 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Xrn1P97789 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
Xrn1P97789 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC32.66■■■□□ 2.82
Xrn1P97789 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Xrn1P97789 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Xrn1P97789 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Xrn1P97789 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC32.65■■■□□ 2.82
Xrn1P97789 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Xrn1P97789 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Xrn1P97789 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Xrn1P97789 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Xrn1P97789 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC32.64■■■□□ 2.82
Xrn1P97789 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Xrn1P97789 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC32.62■■■□□ 2.81
Xrn1P97789 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
Xrn1P97789 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Xrn1P97789 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Xrn1P97789 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Xrn1P97789 Fezf2-202ENSMUST00000224023 1917 ntBASIC32.59■■■□□ 2.81
Xrn1P97789 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
Xrn1P97789 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC32.59■■■□□ 2.81
Xrn1P97789 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Xrn1P97789 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Xrn1P97789 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC32.58■■■□□ 2.81
Xrn1P97789 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Xrn1P97789 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Xrn1P97789 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
Xrn1P97789 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
Xrn1P97789 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC32.57■■■□□ 2.81
Xrn1P97789 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Xrn1P97789 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Xrn1P97789 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Xrn1P97789 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Xrn1P97789 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Xrn1P97789 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC32.56■■■□□ 2.8
Xrn1P97789 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Xrn1P97789 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Xrn1P97789 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Xrn1P97789 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
Xrn1P97789 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC32.54■■■□□ 2.8
Xrn1P97789 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Xrn1P97789 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Xrn1P97789 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Xrn1P97789 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Xrn1P97789 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC32.54■■■□□ 2.8
Xrn1P97789 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Xrn1P97789 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
Xrn1P97789 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Xrn1P97789 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Xrn1P97789 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Xrn1P97789 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Xrn1P97789 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC32.52■■■□□ 2.8
Xrn1P97789 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
Xrn1P97789 AC122428.3-201ENSMUST00000215551 2290 ntBASIC32.52■■■□□ 2.8
Xrn1P97789 Gm16464-201ENSMUST00000117815 1095 ntBASIC32.51■■■□□ 2.79
Xrn1P97789 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC32.51■■■□□ 2.79
Xrn1P97789 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Xrn1P97789 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC32.5■■■□□ 2.79
Xrn1P97789 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Xrn1P97789 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Xrn1P97789 Gm21956-201ENSMUST00000179946 522 ntBASIC32.5■■■□□ 2.79
Xrn1P97789 Etf1-202ENSMUST00000180351 108 ntBASIC32.5■■■□□ 2.79
Xrn1P97789 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC32.5■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms