Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf1P81269 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atf1P81269 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf1P81269 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf1P81269 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.09■□□□□ 0.65
Atf1P81269 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atf1P81269 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atf1P81269 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Atf1P81269 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Atf1P81269 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf1P81269 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf1P81269 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atf1P81269 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Atf1P81269 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf1P81269 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf1P81269 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf1P81269 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Atf1P81269 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atf1P81269 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Atf1P81269 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.06■□□□□ 0.64
Atf1P81269 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.06■□□□□ 0.64
Atf1P81269 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf1P81269 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf1P81269 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.06■□□□□ 0.64
Atf1P81269 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf1P81269 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf1P81269 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf1P81269 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.06■□□□□ 0.64
Atf1P81269 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.06■□□□□ 0.64
Atf1P81269 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf1P81269 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf1P81269 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf1P81269 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Atf1P81269 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.05■□□□□ 0.64
Atf1P81269 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.05■□□□□ 0.64
Atf1P81269 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atf1P81269 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf1P81269 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf1P81269 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atf1P81269 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atf1P81269 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf1P81269 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf1P81269 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atf1P81269 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf1P81269 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf1P81269 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.04■□□□□ 0.64
Atf1P81269 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atf1P81269 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atf1P81269 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf1P81269 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atf1P81269 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf1P81269 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Atf1P81269 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.03■□□□□ 0.64
Atf1P81269 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf1P81269 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Atf1P81269 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf1P81269 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf1P81269 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atf1P81269 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf1P81269 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf1P81269 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Atf1P81269 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Atf1P81269 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Atf1P81269 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf1P81269 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf1P81269 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf1P81269 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf1P81269 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Atf1P81269 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.01■□□□□ 0.63
Atf1P81269 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf1P81269 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf1P81269 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf1P81269 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Atf1P81269 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19■□□□□ 0.63
Atf1P81269 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Atf1P81269 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19■□□□□ 0.63
Atf1P81269 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19■□□□□ 0.63
Atf1P81269 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf1P81269 Gm6311-201ENSMUST00000073790 878 ntBASIC19■□□□□ 0.63
Atf1P81269 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf1P81269 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf1P81269 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19■□□□□ 0.63
Atf1P81269 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf1P81269 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Atf1P81269 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.99■□□□□ 0.63
Atf1P81269 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Atf1P81269 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf1P81269 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.98■□□□□ 0.63
Atf1P81269 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf1P81269 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Atf1P81269 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf1P81269 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf1P81269 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf1P81269 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf1P81269 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf1P81269 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Atf1P81269 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf1P81269 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
Atf1P81269 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf1P81269 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 155.4 ms