Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.53■□□□□ 0.56
Lhx4P53776 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx4P53776 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx4P53776 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx4P53776 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lhx4P53776 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.53■□□□□ 0.56
Lhx4P53776 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx4P53776 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx4P53776 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx4P53776 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lhx4P53776 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx4P53776 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx4P53776 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx4P53776 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx4P53776 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.52■□□□□ 0.56
Lhx4P53776 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx4P53776 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lhx4P53776 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lhx4P53776 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lhx4P53776 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx4P53776 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx4P53776 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx4P53776 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx4P53776 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.51■□□□□ 0.55
Lhx4P53776 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lhx4P53776 Terc-201ENSMUST00000082862 423 ntBASIC18.51■□□□□ 0.55
Lhx4P53776 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.5■□□□□ 0.55
Lhx4P53776 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Lhx4P53776 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx4P53776 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx4P53776 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx4P53776 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx4P53776 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lhx4P53776 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx4P53776 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx4P53776 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Lhx4P53776 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx4P53776 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.49■□□□□ 0.55
Lhx4P53776 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lhx4P53776 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx4P53776 Gm27502-201ENSMUST00000183495 199 ntBASIC18.48■□□□□ 0.55
Lhx4P53776 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx4P53776 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.48■□□□□ 0.55
Lhx4P53776 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.48■□□□□ 0.55
Lhx4P53776 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx4P53776 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx4P53776 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.48■□□□□ 0.55
Lhx4P53776 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lhx4P53776 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Lhx4P53776 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx4P53776 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx4P53776 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.47■□□□□ 0.55
Lhx4P53776 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx4P53776 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lhx4P53776 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx4P53776 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx4P53776 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lhx4P53776 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx4P53776 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx4P53776 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.46■□□□□ 0.55
Lhx4P53776 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx4P53776 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx4P53776 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.46■□□□□ 0.55
Lhx4P53776 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx4P53776 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx4P53776 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lhx4P53776 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.54
Lhx4P53776 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lhx4P53776 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx4P53776 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx4P53776 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx4P53776 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx4P53776 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx4P53776 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx4P53776 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.45■□□□□ 0.54
Lhx4P53776 Gm12366-201ENSMUST00000121722 873 ntBASIC18.45■□□□□ 0.54
Lhx4P53776 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.45■□□□□ 0.54
Lhx4P53776 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.45■□□□□ 0.54
Lhx4P53776 Gm5786-201ENSMUST00000085368 882 ntBASIC18.45■□□□□ 0.54
Lhx4P53776 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lhx4P53776 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx4P53776 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx4P53776 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx4P53776 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.45■□□□□ 0.54
Lhx4P53776 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lhx4P53776 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx4P53776 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Lhx4P53776 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx4P53776 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx4P53776 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx4P53776 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx4P53776 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lhx4P53776 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Lhx4P53776 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx4P53776 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx4P53776 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx4P53776 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx4P53776 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx4P53776 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lhx4P53776 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms