Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChrneP20782 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChrneP20782 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChrneP20782 Gm27502-201ENSMUST00000183495 199 ntBASIC20.81■□□□□ 0.92
ChrneP20782 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ChrneP20782 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ChrneP20782 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ChrneP20782 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.81■□□□□ 0.92
ChrneP20782 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ChrneP20782 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ChrneP20782 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ChrneP20782 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ChrneP20782 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.8■□□□□ 0.92
ChrneP20782 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ChrneP20782 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ChrneP20782 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
ChrneP20782 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ChrneP20782 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ChrneP20782 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ChrneP20782 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ChrneP20782 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ChrneP20782 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ChrneP20782 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.79■□□□□ 0.92
ChrneP20782 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ChrneP20782 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.78■□□□□ 0.92
ChrneP20782 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ChrneP20782 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.78■□□□□ 0.92
ChrneP20782 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.78■□□□□ 0.92
ChrneP20782 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.78■□□□□ 0.92
ChrneP20782 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
ChrneP20782 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ChrneP20782 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ChrneP20782 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ChrneP20782 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
ChrneP20782 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ChrneP20782 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ChrneP20782 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
ChrneP20782 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.76■□□□□ 0.91
ChrneP20782 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ChrneP20782 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ChrneP20782 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ChrneP20782 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.76■□□□□ 0.91
ChrneP20782 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ChrneP20782 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ChrneP20782 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ChrneP20782 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ChrneP20782 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ChrneP20782 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ChrneP20782 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ChrneP20782 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ChrneP20782 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ChrneP20782 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ChrneP20782 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ChrneP20782 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ChrneP20782 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.72■□□□□ 0.91
ChrneP20782 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChrneP20782 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChrneP20782 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChrneP20782 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ChrneP20782 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChrneP20782 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChrneP20782 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChrneP20782 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ChrneP20782 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChrneP20782 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.71■□□□□ 0.91
ChrneP20782 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ChrneP20782 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ChrneP20782 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
ChrneP20782 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ChrneP20782 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ChrneP20782 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.7■□□□□ 0.9
ChrneP20782 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.7■□□□□ 0.9
ChrneP20782 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ChrneP20782 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ChrneP20782 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ChrneP20782 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChrneP20782 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChrneP20782 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.69■□□□□ 0.9
ChrneP20782 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.69■□□□□ 0.9
ChrneP20782 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChrneP20782 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChrneP20782 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ChrneP20782 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ChrneP20782 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ChrneP20782 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChrneP20782 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.68■□□□□ 0.9
ChrneP20782 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChrneP20782 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ChrneP20782 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChrneP20782 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ChrneP20782 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ChrneP20782 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ChrneP20782 Gm10420-201ENSMUST00000121713 882 ntBASIC20.67■□□□□ 0.9
ChrneP20782 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChrneP20782 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChrneP20782 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ChrneP20782 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ChrneP20782 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ChrneP20782 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ChrneP20782 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms