Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P20040 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P20040 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P20040 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.49■□□□□ 0.71
P20040 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
P20040 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P20040 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 Gm45364-201ENSMUST00000210883 159 ntBASIC19.48■□□□□ 0.71
P20040 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P20040 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
P20040 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P20040 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P20040 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P20040 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P20040 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.46■□□□□ 0.71
P20040 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P20040 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
P20040 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
P20040 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P20040 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
P20040 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
P20040 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P20040 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P20040 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P20040 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
P20040 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P20040 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
P20040 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
P20040 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
P20040 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P20040 Gm11175-201ENSMUST00000116172 543 ntBASIC19.43■□□□□ 0.7
P20040 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P20040 Mir6538-201ENSMUST00000183713 110 ntBASIC19.43■□□□□ 0.7
P20040 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P20040 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
P20040 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P20040 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P20040 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
P20040 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P20040 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.41■□□□□ 0.7
P20040 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P20040 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P20040 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P20040 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P20040 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P20040 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.4■□□□□ 0.7
P20040 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 Gm9812-201ENSMUST00000061934 968 ntBASIC19.4■□□□□ 0.7
P20040 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.4■□□□□ 0.7
P20040 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P20040 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.4■□□□□ 0.7
P20040 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.39■□□□□ 0.7
P20040 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
P20040 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Scarna2-201ENSMUST00000157560 414 ntBASIC19.39■□□□□ 0.69
P20040 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
P20040 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.39■□□□□ 0.69
P20040 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P20040 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
P20040 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P20040 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P20040 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P20040 Gm9806-201ENSMUST00000051080 552 ntBASIC19.38■□□□□ 0.69
P20040 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P20040 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
P20040 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.37■□□□□ 0.69
P20040 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P20040 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms