Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
NclP09405 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC32.96■■■□□ 2.87
NclP09405 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
NclP09405 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC32.96■■■□□ 2.87
NclP09405 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC32.95■■■□□ 2.87
NclP09405 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC32.94■■■□□ 2.86
NclP09405 Gm43566-201ENSMUST00000196851 808 ntBASIC32.94■■■□□ 2.86
NclP09405 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
NclP09405 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
NclP09405 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
NclP09405 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
NclP09405 Gm13238-201ENSMUST00000117655 780 ntBASIC32.93■■■□□ 2.86
NclP09405 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC32.93■■■□□ 2.86
NclP09405 Gm45444-201ENSMUST00000211394 898 ntBASIC32.93■■■□□ 2.86
NclP09405 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
NclP09405 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
NclP09405 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
NclP09405 Gm15546-201ENSMUST00000122095 826 ntBASIC32.92■■■□□ 2.86
NclP09405 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
NclP09405 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
NclP09405 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
NclP09405 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
NclP09405 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
NclP09405 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
NclP09405 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC32.9■■■□□ 2.86
NclP09405 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
NclP09405 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC32.89■■■□□ 2.86
NclP09405 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC32.88■■■□□ 2.85
NclP09405 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
NclP09405 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
NclP09405 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
NclP09405 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
NclP09405 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
NclP09405 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC32.86■■■□□ 2.85
NclP09405 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC32.86■■■□□ 2.85
NclP09405 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
NclP09405 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
NclP09405 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
NclP09405 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
NclP09405 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.84■■■□□ 2.85
NclP09405 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
NclP09405 Gm5522-201ENSMUST00000189483 1242 ntBASIC32.84■■■□□ 2.85
NclP09405 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
NclP09405 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
NclP09405 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
NclP09405 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
NclP09405 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC32.82■■■□□ 2.84
NclP09405 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
NclP09405 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC32.81■■■□□ 2.84
NclP09405 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC32.81■■■□□ 2.84
NclP09405 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC32.81■■■□□ 2.84
NclP09405 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
NclP09405 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
NclP09405 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NclP09405 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NclP09405 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC32.79■■■□□ 2.84
NclP09405 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
NclP09405 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
NclP09405 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
NclP09405 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC32.78■■■□□ 2.84
NclP09405 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC32.78■■■□□ 2.84
NclP09405 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC32.78■■■□□ 2.84
NclP09405 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
NclP09405 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
NclP09405 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
NclP09405 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
NclP09405 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
NclP09405 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
NclP09405 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC32.76■■■□□ 2.83
NclP09405 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
NclP09405 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
NclP09405 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
NclP09405 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC32.74■■■□□ 2.83
NclP09405 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
NclP09405 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
NclP09405 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC32.73■■■□□ 2.83
NclP09405 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
NclP09405 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC32.73■■■□□ 2.83
NclP09405 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
NclP09405 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
NclP09405 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
NclP09405 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
NclP09405 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
NclP09405 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC32.7■■■□□ 2.83
NclP09405 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
NclP09405 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
NclP09405 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
NclP09405 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
NclP09405 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
NclP09405 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC32.68■■■□□ 2.82
NclP09405 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC32.68■■■□□ 2.82
NclP09405 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
NclP09405 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
NclP09405 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
NclP09405 Gm42699-201ENSMUST00000198104 1657 ntBASIC32.66■■■□□ 2.82
NclP09405 Gm15820-201ENSMUST00000201566 728 ntBASIC32.66■■■□□ 2.82
NclP09405 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
NclP09405 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
NclP09405 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
NclP09405 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC32.65■■■□□ 2.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms