Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Best1O88870 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Best1O88870 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Best1O88870 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.52■■□□□ 1.04
Best1O88870 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Best1O88870 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.51■■□□□ 1.03
Best1O88870 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Best1O88870 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Best1O88870 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Best1O88870 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Best1O88870 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Best1O88870 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Best1O88870 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Best1O88870 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Best1O88870 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.49■■□□□ 1.03
Best1O88870 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.49■■□□□ 1.03
Best1O88870 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Best1O88870 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Best1O88870 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Best1O88870 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Best1O88870 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Best1O88870 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.48■■□□□ 1.03
Best1O88870 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Best1O88870 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.48■■□□□ 1.03
Best1O88870 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Best1O88870 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.47■■□□□ 1.03
Best1O88870 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.47■■□□□ 1.03
Best1O88870 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Best1O88870 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Best1O88870 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Best1O88870 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Best1O88870 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Best1O88870 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Best1O88870 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Best1O88870 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.46■■□□□ 1.03
Best1O88870 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Best1O88870 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Best1O88870 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Best1O88870 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.45■■□□□ 1.02
Best1O88870 Gm45444-201ENSMUST00000211394 898 ntBASIC21.45■■□□□ 1.02
Best1O88870 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Best1O88870 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.44■■□□□ 1.02
Best1O88870 Gm43566-201ENSMUST00000196851 808 ntBASIC21.44■■□□□ 1.02
Best1O88870 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.44■■□□□ 1.02
Best1O88870 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Best1O88870 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Best1O88870 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Best1O88870 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Best1O88870 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Best1O88870 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Best1O88870 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Best1O88870 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.42■■□□□ 1.02
Best1O88870 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Best1O88870 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Best1O88870 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Best1O88870 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Best1O88870 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Best1O88870 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Best1O88870 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Best1O88870 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Best1O88870 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Best1O88870 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Best1O88870 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Best1O88870 Gm5812-201ENSMUST00000061073 957 ntBASIC21.41■■□□□ 1.02
Best1O88870 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.4■■□□□ 1.02
Best1O88870 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Best1O88870 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Best1O88870 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Best1O88870 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Best1O88870 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Best1O88870 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Best1O88870 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Best1O88870 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Best1O88870 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.39■■□□□ 1.01
Best1O88870 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Best1O88870 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Best1O88870 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Best1O88870 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Best1O88870 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Best1O88870 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Best1O88870 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Best1O88870 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Best1O88870 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Best1O88870 Gm13238-201ENSMUST00000117655 780 ntBASIC21.37■■□□□ 1.01
Best1O88870 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Best1O88870 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Best1O88870 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Best1O88870 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Best1O88870 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Best1O88870 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Best1O88870 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Best1O88870 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Best1O88870 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Best1O88870 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Best1O88870 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Best1O88870 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.35■■□□□ 1.01
Best1O88870 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Best1O88870 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Best1O88870 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Best1O88870 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms