Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Capn1O35350 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Capn1O35350 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Capn1O35350 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Capn1O35350 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Capn1O35350 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capn1O35350 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capn1O35350 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Capn1O35350 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capn1O35350 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capn1O35350 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Capn1O35350 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Capn1O35350 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Capn1O35350 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Capn1O35350 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Capn1O35350 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Capn1O35350 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Capn1O35350 Gm5812-201ENSMUST00000061073 957 ntBASIC20.26■□□□□ 0.83
Capn1O35350 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Capn1O35350 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Capn1O35350 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Capn1O35350 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Capn1O35350 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Capn1O35350 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Capn1O35350 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Capn1O35350 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Capn1O35350 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Capn1O35350 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
Capn1O35350 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Capn1O35350 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Capn1O35350 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Capn1O35350 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Capn1O35350 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Capn1O35350 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Capn1O35350 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Capn1O35350 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Capn1O35350 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capn1O35350 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Capn1O35350 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.22■□□□□ 0.83
Capn1O35350 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.22■□□□□ 0.83
Capn1O35350 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capn1O35350 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capn1O35350 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Capn1O35350 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Capn1O35350 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.21■□□□□ 0.83
Capn1O35350 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Capn1O35350 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Capn1O35350 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.21■□□□□ 0.83
Capn1O35350 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Capn1O35350 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Capn1O35350 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Capn1O35350 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Capn1O35350 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Capn1O35350 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Capn1O35350 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.2■□□□□ 0.82
Capn1O35350 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Capn1O35350 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Capn1O35350 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Capn1O35350 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Capn1O35350 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Capn1O35350 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Capn1O35350 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Capn1O35350 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Capn1O35350 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Capn1O35350 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capn1O35350 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capn1O35350 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
Capn1O35350 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Capn1O35350 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capn1O35350 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Capn1O35350 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.17■□□□□ 0.82
Capn1O35350 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Capn1O35350 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.17■□□□□ 0.82
Capn1O35350 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn1O35350 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Capn1O35350 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.16■□□□□ 0.82
Capn1O35350 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Capn1O35350 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.16■□□□□ 0.82
Capn1O35350 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capn1O35350 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Capn1O35350 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capn1O35350 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Capn1O35350 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn1O35350 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.15■□□□□ 0.82
Capn1O35350 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Capn1O35350 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn1O35350 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn1O35350 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capn1O35350 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Capn1O35350 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Capn1O35350 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn1O35350 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn1O35350 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capn1O35350 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.14■□□□□ 0.81
Capn1O35350 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Capn1O35350 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capn1O35350 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capn1O35350 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capn1O35350 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Capn1O35350 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms