Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Atf6F6VAN0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Atf6F6VAN0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Atf6F6VAN0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Atf6F6VAN0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.66■■□□□ 1.22
Atf6F6VAN0 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.66■■□□□ 1.22
Atf6F6VAN0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atf6F6VAN0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atf6F6VAN0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Atf6F6VAN0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Atf6F6VAN0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Atf6F6VAN0 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.64■■□□□ 1.21
Atf6F6VAN0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Atf6F6VAN0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf6F6VAN0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Atf6F6VAN0 Gm11687-201ENSMUST00000118911 886 ntBASIC22.63■■□□□ 1.21
Atf6F6VAN0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.63■■□□□ 1.21
Atf6F6VAN0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.63■■□□□ 1.21
Atf6F6VAN0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf6F6VAN0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Atf6F6VAN0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Atf6F6VAN0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf6F6VAN0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf6F6VAN0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf6F6VAN0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Atf6F6VAN0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Atf6F6VAN0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf6F6VAN0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf6F6VAN0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf6F6VAN0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.62■■□□□ 1.21
Atf6F6VAN0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf6F6VAN0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Atf6F6VAN0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf6F6VAN0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Atf6F6VAN0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf6F6VAN0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Atf6F6VAN0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf6F6VAN0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Atf6F6VAN0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Atf6F6VAN0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Atf6F6VAN0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Atf6F6VAN0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atf6F6VAN0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atf6F6VAN0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Atf6F6VAN0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atf6F6VAN0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Atf6F6VAN0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Atf6F6VAN0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf6F6VAN0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf6F6VAN0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf6F6VAN0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Atf6F6VAN0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Atf6F6VAN0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Atf6F6VAN0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atf6F6VAN0 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.56■■□□□ 1.2
Atf6F6VAN0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Atf6F6VAN0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Atf6F6VAN0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Atf6F6VAN0 Gm44428-201ENSMUST00000204474 874 ntBASIC22.56■■□□□ 1.2
Atf6F6VAN0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atf6F6VAN0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atf6F6VAN0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
Atf6F6VAN0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Atf6F6VAN0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atf6F6VAN0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.54■■□□□ 1.2
Atf6F6VAN0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Atf6F6VAN0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Atf6F6VAN0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Atf6F6VAN0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Atf6F6VAN0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.52■■□□□ 1.2
Atf6F6VAN0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Atf6F6VAN0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Atf6F6VAN0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Atf6F6VAN0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atf6F6VAN0 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.51■■□□□ 1.19
Atf6F6VAN0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Atf6F6VAN0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Atf6F6VAN0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Atf6F6VAN0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.5■■□□□ 1.19
Atf6F6VAN0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Atf6F6VAN0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atf6F6VAN0 Gm11175-201ENSMUST00000116172 543 ntBASIC22.49■■□□□ 1.19
Atf6F6VAN0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atf6F6VAN0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Atf6F6VAN0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Atf6F6VAN0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Atf6F6VAN0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Atf6F6VAN0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.48■■□□□ 1.19
Atf6F6VAN0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.48■■□□□ 1.19
Atf6F6VAN0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms