Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC34.49■■■■□ 3.11
Ccdc141E9Q8Q6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Ccdc141E9Q8Q6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Ccdc141E9Q8Q6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC34.49■■■■□ 3.11
Ccdc141E9Q8Q6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC34.48■■■■□ 3.11
Ccdc141E9Q8Q6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Ccdc141E9Q8Q6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Ccdc141E9Q8Q6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Ccdc141E9Q8Q6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC34.46■■■■□ 3.11
Ccdc141E9Q8Q6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
Ccdc141E9Q8Q6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Ccdc141E9Q8Q6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Ccdc141E9Q8Q6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Ccdc141E9Q8Q6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC34.43■■■■□ 3.1
Ccdc141E9Q8Q6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC34.42■■■■□ 3.1
Ccdc141E9Q8Q6 Gm7199-201ENSMUST00000118327 1485 ntBASIC34.42■■■■□ 3.1
Ccdc141E9Q8Q6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC34.41■■■■□ 3.1
Ccdc141E9Q8Q6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
Ccdc141E9Q8Q6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ccdc141E9Q8Q6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC34.4■■■■□ 3.1
Ccdc141E9Q8Q6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
Ccdc141E9Q8Q6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC34.4■■■■□ 3.1
Ccdc141E9Q8Q6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC34.4■■■■□ 3.1
Ccdc141E9Q8Q6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ccdc141E9Q8Q6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ccdc141E9Q8Q6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Ccdc141E9Q8Q6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Ccdc141E9Q8Q6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC34.38■■■■□ 3.09
Ccdc141E9Q8Q6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC34.37■■■■□ 3.09
Ccdc141E9Q8Q6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC34.36■■■■□ 3.09
Ccdc141E9Q8Q6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Ccdc141E9Q8Q6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC34.35■■■■□ 3.09
Ccdc141E9Q8Q6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Ccdc141E9Q8Q6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC34.35■■■■□ 3.09
Ccdc141E9Q8Q6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Ccdc141E9Q8Q6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Ccdc141E9Q8Q6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC34.34■■■■□ 3.09
Ccdc141E9Q8Q6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Ccdc141E9Q8Q6 Gm16464-201ENSMUST00000117815 1095 ntBASIC34.33■■■■□ 3.09
Ccdc141E9Q8Q6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
Ccdc141E9Q8Q6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
Ccdc141E9Q8Q6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC34.32■■■■□ 3.08
Ccdc141E9Q8Q6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC34.32■■■■□ 3.08
Ccdc141E9Q8Q6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC34.31■■■■□ 3.08
Ccdc141E9Q8Q6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC34.31■■■■□ 3.08
Ccdc141E9Q8Q6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Ccdc141E9Q8Q6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC34.29■■■■□ 3.08
Ccdc141E9Q8Q6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC34.29■■■■□ 3.08
Ccdc141E9Q8Q6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
Ccdc141E9Q8Q6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Ccdc141E9Q8Q6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
Ccdc141E9Q8Q6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Ccdc141E9Q8Q6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC34.27■■■■□ 3.08
Ccdc141E9Q8Q6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC34.27■■■■□ 3.08
Ccdc141E9Q8Q6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Ccdc141E9Q8Q6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Ccdc141E9Q8Q6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
Ccdc141E9Q8Q6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Ccdc141E9Q8Q6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Ccdc141E9Q8Q6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC34.25■■■■□ 3.07
Ccdc141E9Q8Q6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Ccdc141E9Q8Q6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC34.24■■■■□ 3.07
Ccdc141E9Q8Q6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Ccdc141E9Q8Q6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Ccdc141E9Q8Q6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
Ccdc141E9Q8Q6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Ccdc141E9Q8Q6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
Ccdc141E9Q8Q6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Ccdc141E9Q8Q6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC34.22■■■■□ 3.07
Ccdc141E9Q8Q6 Gm21956-201ENSMUST00000179946 522 ntBASIC34.2■■■■□ 3.07
Ccdc141E9Q8Q6 Gm13241-201ENSMUST00000094493 780 ntBASIC34.2■■■■□ 3.07
Ccdc141E9Q8Q6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Ccdc141E9Q8Q6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
Ccdc141E9Q8Q6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC34.2■■■■□ 3.06
Ccdc141E9Q8Q6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC34.2■■■■□ 3.06
Ccdc141E9Q8Q6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
Ccdc141E9Q8Q6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC34.19■■■■□ 3.06
Ccdc141E9Q8Q6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC34.18■■■■□ 3.06
Ccdc141E9Q8Q6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC34.18■■■■□ 3.06
Ccdc141E9Q8Q6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC34.17■■■■□ 3.06
Ccdc141E9Q8Q6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Ccdc141E9Q8Q6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC34.17■■■■□ 3.06
Ccdc141E9Q8Q6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Ccdc141E9Q8Q6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC34.16■■■■□ 3.06
Ccdc141E9Q8Q6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
Ccdc141E9Q8Q6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
Ccdc141E9Q8Q6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
Ccdc141E9Q8Q6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC34.15■■■■□ 3.06
Ccdc141E9Q8Q6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Ccdc141E9Q8Q6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC34.15■■■■□ 3.06
Ccdc141E9Q8Q6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Ccdc141E9Q8Q6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Ccdc141E9Q8Q6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
Ccdc141E9Q8Q6 Gm7417-201ENSMUST00000192950 473 ntBASIC34.14■■■■□ 3.06
Ccdc141E9Q8Q6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Ccdc141E9Q8Q6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Ccdc141E9Q8Q6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC34.12■■■■□ 3.05
Ccdc141E9Q8Q6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Ccdc141E9Q8Q6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
Ccdc141E9Q8Q6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC34.11■■■■□ 3.05
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms