Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ube4aE9Q735 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.05■■□□□ 1.92
Ube4aE9Q735 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Ube4aE9Q735 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ube4aE9Q735 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ube4aE9Q735 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ube4aE9Q735 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ube4aE9Q735 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Ube4aE9Q735 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.04■■□□□ 1.92
Ube4aE9Q735 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Ube4aE9Q735 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Ube4aE9Q735 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
Ube4aE9Q735 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ube4aE9Q735 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ube4aE9Q735 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ube4aE9Q735 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ube4aE9Q735 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ube4aE9Q735 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Ube4aE9Q735 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ube4aE9Q735 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Ube4aE9Q735 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Ube4aE9Q735 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Ube4aE9Q735 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
Ube4aE9Q735 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ube4aE9Q735 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ube4aE9Q735 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ube4aE9Q735 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ube4aE9Q735 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ube4aE9Q735 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ube4aE9Q735 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ube4aE9Q735 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ube4aE9Q735 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.99■■□□□ 1.91
Ube4aE9Q735 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Ube4aE9Q735 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.99■■□□□ 1.91
Ube4aE9Q735 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Ube4aE9Q735 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ube4aE9Q735 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ube4aE9Q735 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ube4aE9Q735 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ube4aE9Q735 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ube4aE9Q735 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.97■■□□□ 1.91
Ube4aE9Q735 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ube4aE9Q735 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ube4aE9Q735 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.97■■□□□ 1.91
Ube4aE9Q735 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ube4aE9Q735 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Ube4aE9Q735 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ube4aE9Q735 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Ube4aE9Q735 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
Ube4aE9Q735 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC26.95■■□□□ 1.9
Ube4aE9Q735 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
Ube4aE9Q735 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.95■■□□□ 1.9
Ube4aE9Q735 Rps24-207ENSMUST00000224568 714 ntBASIC26.95■■□□□ 1.9
Ube4aE9Q735 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Ube4aE9Q735 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ube4aE9Q735 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.94■■□□□ 1.9
Ube4aE9Q735 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ube4aE9Q735 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ube4aE9Q735 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Ube4aE9Q735 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Ube4aE9Q735 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ube4aE9Q735 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ube4aE9Q735 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Ube4aE9Q735 Gm45102-201ENSMUST00000207427 857 ntBASIC26.93■■□□□ 1.9
Ube4aE9Q735 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC26.93■■□□□ 1.9
Ube4aE9Q735 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ube4aE9Q735 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ube4aE9Q735 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.92■■□□□ 1.9
Ube4aE9Q735 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
Ube4aE9Q735 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ube4aE9Q735 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ube4aE9Q735 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ube4aE9Q735 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ube4aE9Q735 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ube4aE9Q735 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.9■■□□□ 1.9
Ube4aE9Q735 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Ube4aE9Q735 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ube4aE9Q735 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
Ube4aE9Q735 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ube4aE9Q735 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC26.89■■□□□ 1.9
Ube4aE9Q735 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ube4aE9Q735 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ube4aE9Q735 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ube4aE9Q735 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Ube4aE9Q735 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.88■■□□□ 1.89
Ube4aE9Q735 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ube4aE9Q735 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.87■■□□□ 1.89
Ube4aE9Q735 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ube4aE9Q735 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ube4aE9Q735 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Ube4aE9Q735 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
Ube4aE9Q735 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.86■■□□□ 1.89
Ube4aE9Q735 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.86■■□□□ 1.89
Ube4aE9Q735 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ube4aE9Q735 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ube4aE9Q735 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.85■■□□□ 1.89
Ube4aE9Q735 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Ube4aE9Q735 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.85■■□□□ 1.89
Ube4aE9Q735 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ube4aE9Q735 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms