Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf213E9Q555 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf213E9Q555 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rnf213E9Q555 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rnf213E9Q555 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf213E9Q555 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf213E9Q555 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rnf213E9Q555 Gm12922-201ENSMUST00000120626 809 ntBASIC11.18□□□□□ -0.62
Rnf213E9Q555 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.18□□□□□ -0.62
Rnf213E9Q555 AC116713.1-201ENSMUST00000215074 430 ntBASIC11.18□□□□□ -0.62
Rnf213E9Q555 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC11.18□□□□□ -0.62
Rnf213E9Q555 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf213E9Q555 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rnf213E9Q555 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Rnf213E9Q555 Gm12821-201ENSMUST00000120022 600 ntBASIC11.18□□□□□ -0.62
Rnf213E9Q555 Gm45417-201ENSMUST00000209533 758 ntBASIC11.18□□□□□ -0.62
Rnf213E9Q555 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC11.17□□□□□ -0.62
Rnf213E9Q555 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf213E9Q555 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Rnf213E9Q555 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rnf213E9Q555 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC11.17□□□□□ -0.62
Rnf213E9Q555 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf213E9Q555 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf213E9Q555 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC11.16□□□□□ -0.62
Rnf213E9Q555 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf213E9Q555 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Rnf213E9Q555 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.16□□□□□ -0.62
Rnf213E9Q555 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC11.16□□□□□ -0.62
Rnf213E9Q555 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf213E9Q555 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rnf213E9Q555 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rnf213E9Q555 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC11.15□□□□□ -0.62
Rnf213E9Q555 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC11.15□□□□□ -0.62
Rnf213E9Q555 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rnf213E9Q555 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rnf213E9Q555 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf213E9Q555 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.14□□□□□ -0.63
Rnf213E9Q555 Gm18284-201ENSMUST00000172604 624 ntBASIC11.14□□□□□ -0.63
Rnf213E9Q555 Gm40881-201ENSMUST00000223397 166 ntBASIC11.14□□□□□ -0.63
Rnf213E9Q555 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf213E9Q555 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.14□□□□□ -0.63
Rnf213E9Q555 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf213E9Q555 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf213E9Q555 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf213E9Q555 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC11.14□□□□□ -0.63
Rnf213E9Q555 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rnf213E9Q555 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC11.14□□□□□ -0.63
Rnf213E9Q555 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rnf213E9Q555 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf213E9Q555 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf213E9Q555 Gm4419-202ENSMUST00000226239 1431 ntBASIC11.13□□□□□ -0.63
Rnf213E9Q555 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf213E9Q555 Gm7417-201ENSMUST00000192950 473 ntBASIC11.13□□□□□ -0.63
Rnf213E9Q555 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf213E9Q555 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.13□□□□□ -0.63
Rnf213E9Q555 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Gm27011-201ENSMUST00000182352 972 ntBASIC11.12□□□□□ -0.63
Rnf213E9Q555 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf213E9Q555 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC11.12□□□□□ -0.63
Rnf213E9Q555 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC11.12□□□□□ -0.63
Rnf213E9Q555 AC117769.4-201ENSMUST00000225679 685 ntBASIC11.12□□□□□ -0.63
Rnf213E9Q555 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf213E9Q555 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf213E9Q555 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf213E9Q555 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rnf213E9Q555 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf213E9Q555 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf213E9Q555 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf213E9Q555 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf213E9Q555 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC11.1□□□□□ -0.63
Rnf213E9Q555 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf213E9Q555 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf213E9Q555 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.1□□□□□ -0.63
Rnf213E9Q555 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf213E9Q555 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rnf213E9Q555 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf213E9Q555 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf213E9Q555 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf213E9Q555 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf213E9Q555 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf213E9Q555 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf213E9Q555 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf213E9Q555 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf213E9Q555 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Rnf213E9Q555 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rnf213E9Q555 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf213E9Q555 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf213E9Q555 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rnf213E9Q555 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf213E9Q555 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms