Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9bA3KGF9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc9bA3KGF9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9bA3KGF9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc9bA3KGF9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc9bA3KGF9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9bA3KGF9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc9bA3KGF9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9bA3KGF9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Ccdc9bA3KGF9 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.8■□□□□ 0.76
Ccdc9bA3KGF9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9bA3KGF9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9bA3KGF9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc9bA3KGF9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9bA3KGF9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9bA3KGF9 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.79■□□□□ 0.76
Ccdc9bA3KGF9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9bA3KGF9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc9bA3KGF9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ccdc9bA3KGF9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc9bA3KGF9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc9bA3KGF9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc9bA3KGF9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc9bA3KGF9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc9bA3KGF9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc9bA3KGF9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc9bA3KGF9 Rps24-207ENSMUST00000224568 714 ntBASIC19.77■□□□□ 0.76
Ccdc9bA3KGF9 Gm9812-201ENSMUST00000061934 968 ntBASIC19.77■□□□□ 0.76
Ccdc9bA3KGF9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc9bA3KGF9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc9bA3KGF9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc9bA3KGF9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc9bA3KGF9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc9bA3KGF9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc9bA3KGF9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc9bA3KGF9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.76■□□□□ 0.75
Ccdc9bA3KGF9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc9bA3KGF9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.76■□□□□ 0.75
Ccdc9bA3KGF9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc9bA3KGF9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc9bA3KGF9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.75■□□□□ 0.75
Ccdc9bA3KGF9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc9bA3KGF9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ccdc9bA3KGF9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc9bA3KGF9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc9bA3KGF9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.74■□□□□ 0.75
Ccdc9bA3KGF9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc9bA3KGF9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc9bA3KGF9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc9bA3KGF9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9bA3KGF9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc9bA3KGF9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9bA3KGF9 Gm15820-201ENSMUST00000201566 728 ntBASIC19.73■□□□□ 0.75
Ccdc9bA3KGF9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9bA3KGF9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc9bA3KGF9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc9bA3KGF9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc9bA3KGF9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9bA3KGF9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9bA3KGF9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc9bA3KGF9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9bA3KGF9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc9bA3KGF9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9bA3KGF9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9bA3KGF9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccdc9bA3KGF9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc9bA3KGF9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc9bA3KGF9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9bA3KGF9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc9bA3KGF9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.69■□□□□ 0.74
Ccdc9bA3KGF9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc9bA3KGF9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc9bA3KGF9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc9bA3KGF9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc9bA3KGF9 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.68■□□□□ 0.74
Ccdc9bA3KGF9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc9bA3KGF9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.68■□□□□ 0.74
Ccdc9bA3KGF9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc9bA3KGF9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc9bA3KGF9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc9bA3KGF9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc9bA3KGF9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc9bA3KGF9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc9bA3KGF9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc9bA3KGF9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc9bA3KGF9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc9bA3KGF9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc9bA3KGF9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc9bA3KGF9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc9bA3KGF9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc9bA3KGF9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc9bA3KGF9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc9bA3KGF9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc9bA3KGF9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc9bA3KGF9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc9bA3KGF9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.65■□□□□ 0.74
Ccdc9bA3KGF9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc9bA3KGF9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc9bA3KGF9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc9bA3KGF9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms