Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv13-2A0A140T8N6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv13-2A0A140T8N6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trbv13-2A0A140T8N6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-2A0A140T8N6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-2A0A140T8N6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv13-2A0A140T8N6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-2A0A140T8N6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-2A0A140T8N6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv13-2A0A140T8N6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-2A0A140T8N6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv13-2A0A140T8N6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-2A0A140T8N6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.32■□□□□ 0.04
Trbv13-2A0A140T8N6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-2A0A140T8N6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Trbv13-2A0A140T8N6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv13-2A0A140T8N6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trbv13-2A0A140T8N6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-2A0A140T8N6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-2A0A140T8N6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-2A0A140T8N6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-2A0A140T8N6 Gm11175-201ENSMUST00000116172 543 ntBASIC15.31■□□□□ 0.04
Trbv13-2A0A140T8N6 Gm44428-201ENSMUST00000204474 874 ntBASIC15.31■□□□□ 0.04
Trbv13-2A0A140T8N6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-2A0A140T8N6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-2A0A140T8N6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.31■□□□□ 0.04
Trbv13-2A0A140T8N6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.31■□□□□ 0.04
Trbv13-2A0A140T8N6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv13-2A0A140T8N6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.3■□□□□ 0.04
Trbv13-2A0A140T8N6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv13-2A0A140T8N6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Trbv13-2A0A140T8N6 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.29■□□□□ 0.04
Trbv13-2A0A140T8N6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Trbv13-2A0A140T8N6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv13-2A0A140T8N6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv13-2A0A140T8N6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv13-2A0A140T8N6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trbv13-2A0A140T8N6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv13-2A0A140T8N6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-2A0A140T8N6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-2A0A140T8N6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-2A0A140T8N6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.28■□□□□ 0.04
Trbv13-2A0A140T8N6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.28■□□□□ 0.04
Trbv13-2A0A140T8N6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv13-2A0A140T8N6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-2A0A140T8N6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-2A0A140T8N6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-2A0A140T8N6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.27■□□□□ 0.04
Trbv13-2A0A140T8N6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-2A0A140T8N6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-2A0A140T8N6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trbv13-2A0A140T8N6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv13-2A0A140T8N6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trbv13-2A0A140T8N6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trbv13-2A0A140T8N6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trbv13-2A0A140T8N6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-2A0A140T8N6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trbv13-2A0A140T8N6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trbv13-2A0A140T8N6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-2A0A140T8N6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trbv13-2A0A140T8N6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-2A0A140T8N6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-2A0A140T8N6 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.25■□□□□ 0.03
Trbv13-2A0A140T8N6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-2A0A140T8N6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-2A0A140T8N6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-2A0A140T8N6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-2A0A140T8N6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-2A0A140T8N6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trbv13-2A0A140T8N6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Trbv13-2A0A140T8N6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv13-2A0A140T8N6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv13-2A0A140T8N6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.24■□□□□ 0.03
Trbv13-2A0A140T8N6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv13-2A0A140T8N6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv13-2A0A140T8N6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.23■□□□□ 0.03
Trbv13-2A0A140T8N6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv13-2A0A140T8N6 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.23■□□□□ 0.03
Trbv13-2A0A140T8N6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv13-2A0A140T8N6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv13-2A0A140T8N6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv13-2A0A140T8N6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv13-2A0A140T8N6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv13-2A0A140T8N6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trbv13-2A0A140T8N6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv13-2A0A140T8N6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv13-2A0A140T8N6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trbv13-2A0A140T8N6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv13-2A0A140T8N6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv13-2A0A140T8N6 Gm27502-201ENSMUST00000183495 199 ntBASIC15.21■□□□□ 0.03
Trbv13-2A0A140T8N6 Mir6538-201ENSMUST00000183713 110 ntBASIC15.21■□□□□ 0.03
Trbv13-2A0A140T8N6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Trbv13-2A0A140T8N6 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.21■□□□□ 0.03
Trbv13-2A0A140T8N6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv13-2A0A140T8N6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv13-2A0A140T8N6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Trbv13-2A0A140T8N6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv13-2A0A140T8N6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms