Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
1700028J19RikA0A0U1RP08 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
1700028J19RikA0A0U1RP08 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
1700028J19RikA0A0U1RP08 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
1700028J19RikA0A0U1RP08 Gm6311-201ENSMUST00000073790 878 ntBASIC20.77■□□□□ 0.92
1700028J19RikA0A0U1RP08 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
1700028J19RikA0A0U1RP08 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
1700028J19RikA0A0U1RP08 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
1700028J19RikA0A0U1RP08 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
1700028J19RikA0A0U1RP08 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
1700028J19RikA0A0U1RP08 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
1700028J19RikA0A0U1RP08 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.76■□□□□ 0.91
1700028J19RikA0A0U1RP08 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
1700028J19RikA0A0U1RP08 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
1700028J19RikA0A0U1RP08 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
1700028J19RikA0A0U1RP08 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
1700028J19RikA0A0U1RP08 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.75■□□□□ 0.91
1700028J19RikA0A0U1RP08 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
1700028J19RikA0A0U1RP08 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
1700028J19RikA0A0U1RP08 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
1700028J19RikA0A0U1RP08 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
1700028J19RikA0A0U1RP08 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
1700028J19RikA0A0U1RP08 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
1700028J19RikA0A0U1RP08 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
1700028J19RikA0A0U1RP08 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
1700028J19RikA0A0U1RP08 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
1700028J19RikA0A0U1RP08 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
1700028J19RikA0A0U1RP08 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.74■□□□□ 0.91
1700028J19RikA0A0U1RP08 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
1700028J19RikA0A0U1RP08 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
1700028J19RikA0A0U1RP08 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
1700028J19RikA0A0U1RP08 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.73■□□□□ 0.91
1700028J19RikA0A0U1RP08 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
1700028J19RikA0A0U1RP08 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
1700028J19RikA0A0U1RP08 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
1700028J19RikA0A0U1RP08 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
1700028J19RikA0A0U1RP08 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
1700028J19RikA0A0U1RP08 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
1700028J19RikA0A0U1RP08 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
1700028J19RikA0A0U1RP08 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
1700028J19RikA0A0U1RP08 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
1700028J19RikA0A0U1RP08 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
1700028J19RikA0A0U1RP08 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
1700028J19RikA0A0U1RP08 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.71■□□□□ 0.91
1700028J19RikA0A0U1RP08 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
1700028J19RikA0A0U1RP08 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
1700028J19RikA0A0U1RP08 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
1700028J19RikA0A0U1RP08 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
1700028J19RikA0A0U1RP08 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
1700028J19RikA0A0U1RP08 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
1700028J19RikA0A0U1RP08 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
1700028J19RikA0A0U1RP08 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
1700028J19RikA0A0U1RP08 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
1700028J19RikA0A0U1RP08 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
1700028J19RikA0A0U1RP08 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
1700028J19RikA0A0U1RP08 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
1700028J19RikA0A0U1RP08 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
1700028J19RikA0A0U1RP08 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
1700028J19RikA0A0U1RP08 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
1700028J19RikA0A0U1RP08 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
1700028J19RikA0A0U1RP08 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
1700028J19RikA0A0U1RP08 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.69■□□□□ 0.9
1700028J19RikA0A0U1RP08 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
1700028J19RikA0A0U1RP08 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
1700028J19RikA0A0U1RP08 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
1700028J19RikA0A0U1RP08 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
1700028J19RikA0A0U1RP08 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
1700028J19RikA0A0U1RP08 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
1700028J19RikA0A0U1RP08 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.67■□□□□ 0.9
1700028J19RikA0A0U1RP08 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
1700028J19RikA0A0U1RP08 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
1700028J19RikA0A0U1RP08 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.66■□□□□ 0.9
1700028J19RikA0A0U1RP08 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
1700028J19RikA0A0U1RP08 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
1700028J19RikA0A0U1RP08 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
1700028J19RikA0A0U1RP08 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
1700028J19RikA0A0U1RP08 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
1700028J19RikA0A0U1RP08 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
1700028J19RikA0A0U1RP08 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
1700028J19RikA0A0U1RP08 Gm22567-201ENSMUST00000175542 342 ntBASIC20.65■□□□□ 0.9
1700028J19RikA0A0U1RP08 Gm44428-201ENSMUST00000204474 874 ntBASIC20.65■□□□□ 0.9
1700028J19RikA0A0U1RP08 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
1700028J19RikA0A0U1RP08 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
1700028J19RikA0A0U1RP08 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms