Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav9d-4A0A0G2JG37 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-4A0A0G2JG37 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-4A0A0G2JG37 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-4A0A0G2JG37 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-4A0A0G2JG37 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav9d-4A0A0G2JG37 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav9d-4A0A0G2JG37 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-4A0A0G2JG37 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-4A0A0G2JG37 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-4A0A0G2JG37 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav9d-4A0A0G2JG37 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav9d-4A0A0G2JG37 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-4A0A0G2JG37 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-4A0A0G2JG37 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-4A0A0G2JG37 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-4A0A0G2JG37 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-4A0A0G2JG37 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-4A0A0G2JG37 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-4A0A0G2JG37 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-4A0A0G2JG37 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav9d-4A0A0G2JG37 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-4A0A0G2JG37 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-4A0A0G2JG37 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-4A0A0G2JG37 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-4A0A0G2JG37 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-4A0A0G2JG37 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-4A0A0G2JG37 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-4A0A0G2JG37 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.07■□□□□ 0
Trav9d-4A0A0G2JG37 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-4A0A0G2JG37 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-4A0A0G2JG37 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-4A0A0G2JG37 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-4A0A0G2JG37 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav9d-4A0A0G2JG37 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-4A0A0G2JG37 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-4A0A0G2JG37 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-4A0A0G2JG37 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-4A0A0G2JG37 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.05■□□□□ 0
Trav9d-4A0A0G2JG37 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav9d-4A0A0G2JG37 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9d-4A0A0G2JG37 Gm45855-201ENSMUST00000212546 880 ntBASIC15.05■□□□□ -0
Trav9d-4A0A0G2JG37 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9d-4A0A0G2JG37 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.05■□□□□ -0
Trav9d-4A0A0G2JG37 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-4A0A0G2JG37 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-4A0A0G2JG37 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav9d-4A0A0G2JG37 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-4A0A0G2JG37 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-4A0A0G2JG37 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-4A0A0G2JG37 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-4A0A0G2JG37 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav9d-4A0A0G2JG37 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Trav9d-4A0A0G2JG37 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav9d-4A0A0G2JG37 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-4A0A0G2JG37 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-4A0A0G2JG37 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-4A0A0G2JG37 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-4A0A0G2JG37 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav9d-4A0A0G2JG37 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-4A0A0G2JG37 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-4A0A0G2JG37 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-4A0A0G2JG37 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-4A0A0G2JG37 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9d-4A0A0G2JG37 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9d-4A0A0G2JG37 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9d-4A0A0G2JG37 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.02■□□□□ -0
Trav9d-4A0A0G2JG37 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav9d-4A0A0G2JG37 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-4A0A0G2JG37 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-4A0A0G2JG37 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-4A0A0G2JG37 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9d-4A0A0G2JG37 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav9d-4A0A0G2JG37 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav9d-4A0A0G2JG37 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9d-4A0A0G2JG37 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9d-4A0A0G2JG37 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms