Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Trav23A0A0G2JG17 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav23A0A0G2JG17 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.95■□□□□ 0.46
Trav23A0A0G2JG17 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav23A0A0G2JG17 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav23A0A0G2JG17 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav23A0A0G2JG17 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav23A0A0G2JG17 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Gm12366-201ENSMUST00000121722 873 ntBASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Gm5786-201ENSMUST00000085368 882 ntBASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav23A0A0G2JG17 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav23A0A0G2JG17 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav23A0A0G2JG17 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav23A0A0G2JG17 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav23A0A0G2JG17 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
Trav23A0A0G2JG17 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav23A0A0G2JG17 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav23A0A0G2JG17 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Trav23A0A0G2JG17 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trav23A0A0G2JG17 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav23A0A0G2JG17 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Gm14523-201ENSMUST00000117260 558 ntBASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Gm7332-201ENSMUST00000118351 454 ntBASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Gm44428-201ENSMUST00000204474 874 ntBASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav23A0A0G2JG17 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav23A0A0G2JG17 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.84■□□□□ 0.45
Trav23A0A0G2JG17 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.83■□□□□ 0.45
Trav23A0A0G2JG17 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav23A0A0G2JG17 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.83■□□□□ 0.45
Trav23A0A0G2JG17 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav23A0A0G2JG17 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav23A0A0G2JG17 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav23A0A0G2JG17 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav23A0A0G2JG17 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav23A0A0G2JG17 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav23A0A0G2JG17 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.81■□□□□ 0.44
Trav23A0A0G2JG17 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms