Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav23A0A0G2JG17 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Trav23A0A0G2JG17 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav23A0A0G2JG17 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.95■□□□□ 0.46
Trav23A0A0G2JG17 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav23A0A0G2JG17 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav23A0A0G2JG17 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav23A0A0G2JG17 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav23A0A0G2JG17 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav23A0A0G2JG17 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav23A0A0G2JG17 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Gm12366-201ENSMUST00000121722 873 ntBASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Gm5786-201ENSMUST00000085368 882 ntBASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav23A0A0G2JG17 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav23A0A0G2JG17 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav23A0A0G2JG17 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav23A0A0G2JG17 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav23A0A0G2JG17 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav23A0A0G2JG17 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav23A0A0G2JG17 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
Trav23A0A0G2JG17 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav23A0A0G2JG17 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav23A0A0G2JG17 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Trav23A0A0G2JG17 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trav23A0A0G2JG17 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav23A0A0G2JG17 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav23A0A0G2JG17 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav23A0A0G2JG17 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Gm14523-201ENSMUST00000117260 558 ntBASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Gm7332-201ENSMUST00000118351 454 ntBASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Gm44428-201ENSMUST00000204474 874 ntBASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav23A0A0G2JG17 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav23A0A0G2JG17 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav23A0A0G2JG17 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav23A0A0G2JG17 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.84■□□□□ 0.45
Trav23A0A0G2JG17 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.83■□□□□ 0.45
Trav23A0A0G2JG17 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav23A0A0G2JG17 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.83■□□□□ 0.45
Trav23A0A0G2JG17 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav23A0A0G2JG17 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav23A0A0G2JG17 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav23A0A0G2JG17 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav23A0A0G2JG17 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav23A0A0G2JG17 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav23A0A0G2JG17 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.81■□□□□ 0.44
Trav23A0A0G2JG17 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms