Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.58■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.57■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.55■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.53■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tcrg-V4A0A0B4J1J8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.51■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.5■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.47■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tcrg-V4A0A0B4J1J8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.45■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.45■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tcrg-V4A0A0B4J1J8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms