Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv15A0A0A6YYE3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv15A0A0A6YYE3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.41■□□□□ 0.54
Trbv15A0A0A6YYE3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv15A0A0A6YYE3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trbv15A0A0A6YYE3 Gm45855-201ENSMUST00000212546 880 ntBASIC18.41■□□□□ 0.54
Trbv15A0A0A6YYE3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv15A0A0A6YYE3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv15A0A0A6YYE3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Trbv15A0A0A6YYE3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv15A0A0A6YYE3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv15A0A0A6YYE3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv15A0A0A6YYE3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv15A0A0A6YYE3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv15A0A0A6YYE3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv15A0A0A6YYE3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv15A0A0A6YYE3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trbv15A0A0A6YYE3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.38■□□□□ 0.53
Trbv15A0A0A6YYE3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv15A0A0A6YYE3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv15A0A0A6YYE3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Trbv15A0A0A6YYE3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv15A0A0A6YYE3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv15A0A0A6YYE3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv15A0A0A6YYE3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv15A0A0A6YYE3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.36■□□□□ 0.53
Trbv15A0A0A6YYE3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv15A0A0A6YYE3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv15A0A0A6YYE3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.36■□□□□ 0.53
Trbv15A0A0A6YYE3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv15A0A0A6YYE3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv15A0A0A6YYE3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trbv15A0A0A6YYE3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trbv15A0A0A6YYE3 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.35■□□□□ 0.53
Trbv15A0A0A6YYE3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
Trbv15A0A0A6YYE3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv15A0A0A6YYE3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv15A0A0A6YYE3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv15A0A0A6YYE3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trbv15A0A0A6YYE3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv15A0A0A6YYE3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv15A0A0A6YYE3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.33■□□□□ 0.53
Trbv15A0A0A6YYE3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv15A0A0A6YYE3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv15A0A0A6YYE3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.33■□□□□ 0.52
Trbv15A0A0A6YYE3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.33■□□□□ 0.52
Trbv15A0A0A6YYE3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv15A0A0A6YYE3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv15A0A0A6YYE3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv15A0A0A6YYE3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Trbv15A0A0A6YYE3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv15A0A0A6YYE3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 Gm22567-201ENSMUST00000175542 342 ntBASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv15A0A0A6YYE3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv15A0A0A6YYE3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Trbv15A0A0A6YYE3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv15A0A0A6YYE3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv15A0A0A6YYE3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Trbv15A0A0A6YYE3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv15A0A0A6YYE3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv15A0A0A6YYE3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv15A0A0A6YYE3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv15A0A0A6YYE3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv15A0A0A6YYE3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv15A0A0A6YYE3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv15A0A0A6YYE3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv15A0A0A6YYE3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv15A0A0A6YYE3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv15A0A0A6YYE3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv15A0A0A6YYE3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv15A0A0A6YYE3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv15A0A0A6YYE3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv15A0A0A6YYE3 Nkain2-201ENSMUST00000092602 558 ntBASIC18.28■□□□□ 0.52
Trbv15A0A0A6YYE3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv15A0A0A6YYE3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trbv15A0A0A6YYE3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv15A0A0A6YYE3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv15A0A0A6YYE3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.26■□□□□ 0.51
Trbv15A0A0A6YYE3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv15A0A0A6YYE3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv15A0A0A6YYE3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv15A0A0A6YYE3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trbv15A0A0A6YYE3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trbv15A0A0A6YYE3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Trbv15A0A0A6YYE3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.25■□□□□ 0.51
Trbv15A0A0A6YYE3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv15A0A0A6YYE3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv15A0A0A6YYE3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv15A0A0A6YYE3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv15A0A0A6YYE3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 244.5 ms