Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv3A0A0A6YYE2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trbv3A0A0A6YYE2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv3A0A0A6YYE2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.08■□□□□ 0.33
Trbv3A0A0A6YYE2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv3A0A0A6YYE2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv3A0A0A6YYE2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv3A0A0A6YYE2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv3A0A0A6YYE2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.07■□□□□ 0.32
Trbv3A0A0A6YYE2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trbv3A0A0A6YYE2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv3A0A0A6YYE2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv3A0A0A6YYE2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Trbv3A0A0A6YYE2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.06■□□□□ 0.32
Trbv3A0A0A6YYE2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trbv3A0A0A6YYE2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv3A0A0A6YYE2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv3A0A0A6YYE2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv3A0A0A6YYE2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv3A0A0A6YYE2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv3A0A0A6YYE2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trbv3A0A0A6YYE2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv3A0A0A6YYE2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv3A0A0A6YYE2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv3A0A0A6YYE2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv3A0A0A6YYE2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.04■□□□□ 0.32
Trbv3A0A0A6YYE2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv3A0A0A6YYE2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv3A0A0A6YYE2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trbv3A0A0A6YYE2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv3A0A0A6YYE2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv3A0A0A6YYE2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv3A0A0A6YYE2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv3A0A0A6YYE2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv3A0A0A6YYE2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Trbv3A0A0A6YYE2 Gm24970-201ENSMUST00000175582 82 ntBASIC17.03■□□□□ 0.32
Trbv3A0A0A6YYE2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.03■□□□□ 0.32
Trbv3A0A0A6YYE2 Notumos-201ENSMUST00000151998 2659 ntBASIC17.03■□□□□ 0.32
Trbv3A0A0A6YYE2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv3A0A0A6YYE2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv3A0A0A6YYE2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv3A0A0A6YYE2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv3A0A0A6YYE2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trbv3A0A0A6YYE2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.02■□□□□ 0.31
Trbv3A0A0A6YYE2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.02■□□□□ 0.31
Trbv3A0A0A6YYE2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv3A0A0A6YYE2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trbv3A0A0A6YYE2 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.01■□□□□ 0.31
Trbv3A0A0A6YYE2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv3A0A0A6YYE2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv3A0A0A6YYE2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv3A0A0A6YYE2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv3A0A0A6YYE2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv3A0A0A6YYE2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv3A0A0A6YYE2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17■□□□□ 0.31
Trbv3A0A0A6YYE2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv3A0A0A6YYE2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trbv3A0A0A6YYE2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trbv3A0A0A6YYE2 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.99■□□□□ 0.31
Trbv3A0A0A6YYE2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv3A0A0A6YYE2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv3A0A0A6YYE2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv3A0A0A6YYE2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trbv3A0A0A6YYE2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv3A0A0A6YYE2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv3A0A0A6YYE2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv3A0A0A6YYE2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv3A0A0A6YYE2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.99■□□□□ 0.31
Trbv3A0A0A6YYE2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.98■□□□□ 0.31
Trbv3A0A0A6YYE2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv3A0A0A6YYE2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.97■□□□□ 0.31
Trbv3A0A0A6YYE2 Zfp131-205ENSMUST00000223812 663 ntBASIC16.97■□□□□ 0.31
Trbv3A0A0A6YYE2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv3A0A0A6YYE2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv3A0A0A6YYE2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv3A0A0A6YYE2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv3A0A0A6YYE2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Trbv3A0A0A6YYE2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv3A0A0A6YYE2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv3A0A0A6YYE2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv3A0A0A6YYE2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv3A0A0A6YYE2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv3A0A0A6YYE2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv3A0A0A6YYE2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trbv3A0A0A6YYE2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv3A0A0A6YYE2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv3A0A0A6YYE2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv3A0A0A6YYE2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv3A0A0A6YYE2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv3A0A0A6YYE2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms