Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.42■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1bA0A0A6YXN8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sirpb1bA0A0A6YXN8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Gm45364-201ENSMUST00000210883 159 ntBASIC19.39■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1bA0A0A6YXN8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sirpb1bA0A0A6YXN8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.38■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.38■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1bA0A0A6YXN8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.37■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Gm27502-201ENSMUST00000183495 199 ntBASIC19.37■□□□□ 0.69
Sirpb1bA0A0A6YXN8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Gm37136-201ENSMUST00000194368 194 ntBASIC19.34■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sirpb1bA0A0A6YXN8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sirpb1bA0A0A6YXN8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.33■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1bA0A0A6YXN8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.32■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Sirpb1bA0A0A6YXN8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1bA0A0A6YXN8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Gm7332-201ENSMUST00000118351 454 ntBASIC19.31■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.31■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.3■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sirpb1bA0A0A6YXN8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.29■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.28■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms