Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.59■□□□□ 0.89
Ighv1-43A0A0A6YXN5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv1-43A0A0A6YXN5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.58■□□□□ 0.89
Ighv1-43A0A0A6YXN5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ighv1-43A0A0A6YXN5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.57■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Gm45444-201ENSMUST00000211394 898 ntBASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Gm43566-201ENSMUST00000196851 808 ntBASIC20.55■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv1-43A0A0A6YXN5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-43A0A0A6YXN5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.52■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.52■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ighv1-43A0A0A6YXN5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.51■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Gm13238-201ENSMUST00000117655 780 ntBASIC20.5■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.48■□□□□ 0.87
Ighv1-43A0A0A6YXN5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.48■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ighv1-43A0A0A6YXN5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.47■□□□□ 0.87
Ighv1-43A0A0A6YXN5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Gm15546-201ENSMUST00000122095 826 ntBASIC20.46■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ighv1-43A0A0A6YXN5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.45■□□□□ 0.86
Ighv1-43A0A0A6YXN5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.45■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.44■□□□□ 0.86
Ighv1-43A0A0A6YXN5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.43■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-43A0A0A6YXN5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
Ighv1-43A0A0A6YXN5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ighv1-43A0A0A6YXN5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.41■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.4■□□□□ 0.86
Ighv1-43A0A0A6YXN5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms