Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-7A0A075B6B0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-7A0A075B6B0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-7A0A075B6B0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-7A0A075B6B0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-7A0A075B6B0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6d-7A0A075B6B0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav6d-7A0A075B6B0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-7A0A075B6B0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav6d-7A0A075B6B0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-7A0A075B6B0 Gm37136-201ENSMUST00000194368 194 ntBASIC16.96■□□□□ 0.31
Trav6d-7A0A075B6B0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-7A0A075B6B0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-7A0A075B6B0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6d-7A0A075B6B0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav6d-7A0A075B6B0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav6d-7A0A075B6B0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav6d-7A0A075B6B0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav6d-7A0A075B6B0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.96■□□□□ 0.3
Trav6d-7A0A075B6B0 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.96■□□□□ 0.3
Trav6d-7A0A075B6B0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-7A0A075B6B0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-7A0A075B6B0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav6d-7A0A075B6B0 Mir3960-201ENSMUST00000198213 73 ntBASIC16.95■□□□□ 0.3
Trav6d-7A0A075B6B0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-7A0A075B6B0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav6d-7A0A075B6B0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav6d-7A0A075B6B0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6d-7A0A075B6B0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Trav6d-7A0A075B6B0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-7A0A075B6B0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6d-7A0A075B6B0 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.94■□□□□ 0.3
Trav6d-7A0A075B6B0 Gm11175-201ENSMUST00000116172 543 ntBASIC16.94■□□□□ 0.3
Trav6d-7A0A075B6B0 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.94■□□□□ 0.3
Trav6d-7A0A075B6B0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-7A0A075B6B0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-7A0A075B6B0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-7A0A075B6B0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6d-7A0A075B6B0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav6d-7A0A075B6B0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-7A0A075B6B0 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.92■□□□□ 0.3
Trav6d-7A0A075B6B0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-7A0A075B6B0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-7A0A075B6B0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-7A0A075B6B0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6d-7A0A075B6B0 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.91■□□□□ 0.3
Trav6d-7A0A075B6B0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-7A0A075B6B0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
Trav6d-7A0A075B6B0 Gm11687-201ENSMUST00000118911 886 ntBASIC16.91■□□□□ 0.3
Trav6d-7A0A075B6B0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-7A0A075B6B0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6d-7A0A075B6B0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-7A0A075B6B0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6d-7A0A075B6B0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav6d-7A0A075B6B0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav6d-7A0A075B6B0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-7A0A075B6B0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-7A0A075B6B0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-7A0A075B6B0 Scarna2-201ENSMUST00000157560 414 ntBASIC16.89■□□□□ 0.29
Trav6d-7A0A075B6B0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav6d-7A0A075B6B0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6d-7A0A075B6B0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-7A0A075B6B0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav6d-7A0A075B6B0 Gm9806-201ENSMUST00000051080 552 ntBASIC16.88■□□□□ 0.29
Trav6d-7A0A075B6B0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6d-7A0A075B6B0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6d-7A0A075B6B0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6d-7A0A075B6B0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6d-7A0A075B6B0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms