Protein–RNA interactions for Protein: V9GXR0

H2-Bl, Histocompatibility 2, blastocyst, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-BlV9GXR0 Gm27502-201ENSMUST00000183495 199 ntBASIC21.7■■□□□ 1.06
H2-BlV9GXR0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H2-BlV9GXR0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.7■■□□□ 1.06
H2-BlV9GXR0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2-BlV9GXR0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2-BlV9GXR0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2-BlV9GXR0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H2-BlV9GXR0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
H2-BlV9GXR0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.69■■□□□ 1.06
H2-BlV9GXR0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H2-BlV9GXR0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
H2-BlV9GXR0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H2-BlV9GXR0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H2-BlV9GXR0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.68■■□□□ 1.06
H2-BlV9GXR0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
H2-BlV9GXR0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H2-BlV9GXR0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
H2-BlV9GXR0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2-BlV9GXR0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2-BlV9GXR0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2-BlV9GXR0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
H2-BlV9GXR0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.66■■□□□ 1.06
H2-BlV9GXR0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.66■■□□□ 1.06
H2-BlV9GXR0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2-BlV9GXR0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H2-BlV9GXR0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.66■■□□□ 1.06
H2-BlV9GXR0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
H2-BlV9GXR0 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.64■■□□□ 1.06
H2-BlV9GXR0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
H2-BlV9GXR0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
H2-BlV9GXR0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
H2-BlV9GXR0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.64■■□□□ 1.05
H2-BlV9GXR0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.64■■□□□ 1.05
H2-BlV9GXR0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
H2-BlV9GXR0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
H2-BlV9GXR0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2-BlV9GXR0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2-BlV9GXR0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.63■■□□□ 1.05
H2-BlV9GXR0 Gm12366-201ENSMUST00000121722 873 ntBASIC21.63■■□□□ 1.05
H2-BlV9GXR0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.63■■□□□ 1.05
H2-BlV9GXR0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.63■■□□□ 1.05
H2-BlV9GXR0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2-BlV9GXR0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.63■■□□□ 1.05
H2-BlV9GXR0 Gm5786-201ENSMUST00000085368 882 ntBASIC21.63■■□□□ 1.05
H2-BlV9GXR0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H2-BlV9GXR0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
H2-BlV9GXR0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
H2-BlV9GXR0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
H2-BlV9GXR0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
H2-BlV9GXR0 Gm14523-201ENSMUST00000117260 558 ntBASIC21.61■■□□□ 1.05
H2-BlV9GXR0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
H2-BlV9GXR0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
H2-BlV9GXR0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2-BlV9GXR0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.6■■□□□ 1.05
H2-BlV9GXR0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2-BlV9GXR0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
H2-BlV9GXR0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
H2-BlV9GXR0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
H2-BlV9GXR0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.59■■□□□ 1.05
H2-BlV9GXR0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
H2-BlV9GXR0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
H2-BlV9GXR0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
H2-BlV9GXR0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
H2-BlV9GXR0 Gm7332-201ENSMUST00000118351 454 ntBASIC21.58■■□□□ 1.05
H2-BlV9GXR0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.58■■□□□ 1.05
H2-BlV9GXR0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.57■■□□□ 1.04
H2-BlV9GXR0 Cap2-205ENSMUST00000225824 1634 ntBASIC21.57■■□□□ 1.04
H2-BlV9GXR0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
H2-BlV9GXR0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
H2-BlV9GXR0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2-BlV9GXR0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
H2-BlV9GXR0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
H2-BlV9GXR0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.56■■□□□ 1.04
H2-BlV9GXR0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2-BlV9GXR0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2-BlV9GXR0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
H2-BlV9GXR0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
H2-BlV9GXR0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
H2-BlV9GXR0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms