Protein–RNA interactions for Protein: Q9Z2M6

Ubl3, Ubiquitin-like protein 3, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubl3Q9Z2M6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubl3Q9Z2M6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubl3Q9Z2M6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubl3Q9Z2M6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubl3Q9Z2M6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubl3Q9Z2M6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubl3Q9Z2M6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubl3Q9Z2M6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubl3Q9Z2M6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubl3Q9Z2M6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubl3Q9Z2M6 Terc-201ENSMUST00000082862 423 ntBASIC19.71■□□□□ 0.75
Ubl3Q9Z2M6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ubl3Q9Z2M6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.7■□□□□ 0.74
Ubl3Q9Z2M6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubl3Q9Z2M6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubl3Q9Z2M6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubl3Q9Z2M6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ubl3Q9Z2M6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ubl3Q9Z2M6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ubl3Q9Z2M6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ubl3Q9Z2M6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubl3Q9Z2M6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubl3Q9Z2M6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubl3Q9Z2M6 Gm9806-201ENSMUST00000051080 552 ntBASIC19.68■□□□□ 0.74
Ubl3Q9Z2M6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubl3Q9Z2M6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubl3Q9Z2M6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ubl3Q9Z2M6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubl3Q9Z2M6 Scarna2-201ENSMUST00000157560 414 ntBASIC19.67■□□□□ 0.74
Ubl3Q9Z2M6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubl3Q9Z2M6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubl3Q9Z2M6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubl3Q9Z2M6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ubl3Q9Z2M6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubl3Q9Z2M6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubl3Q9Z2M6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubl3Q9Z2M6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubl3Q9Z2M6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
Ubl3Q9Z2M6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubl3Q9Z2M6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubl3Q9Z2M6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubl3Q9Z2M6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.65■□□□□ 0.74
Ubl3Q9Z2M6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubl3Q9Z2M6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubl3Q9Z2M6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ubl3Q9Z2M6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Ubl3Q9Z2M6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.64■□□□□ 0.74
Ubl3Q9Z2M6 Gm11687-201ENSMUST00000118911 886 ntBASIC19.64■□□□□ 0.73
Ubl3Q9Z2M6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubl3Q9Z2M6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ubl3Q9Z2M6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ubl3Q9Z2M6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.64■□□□□ 0.73
Ubl3Q9Z2M6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ubl3Q9Z2M6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubl3Q9Z2M6 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.63■□□□□ 0.73
Ubl3Q9Z2M6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubl3Q9Z2M6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.63■□□□□ 0.73
Ubl3Q9Z2M6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ubl3Q9Z2M6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.63■□□□□ 0.73
Ubl3Q9Z2M6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubl3Q9Z2M6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ubl3Q9Z2M6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubl3Q9Z2M6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubl3Q9Z2M6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ubl3Q9Z2M6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ubl3Q9Z2M6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ubl3Q9Z2M6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ubl3Q9Z2M6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubl3Q9Z2M6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ubl3Q9Z2M6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubl3Q9Z2M6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubl3Q9Z2M6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubl3Q9Z2M6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ubl3Q9Z2M6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ubl3Q9Z2M6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ubl3Q9Z2M6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ubl3Q9Z2M6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubl3Q9Z2M6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.6■□□□□ 0.73
Ubl3Q9Z2M6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubl3Q9Z2M6 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.6■□□□□ 0.73
Ubl3Q9Z2M6 Gm16437-201ENSMUST00000025669 507 ntBASIC19.6■□□□□ 0.73
Ubl3Q9Z2M6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ubl3Q9Z2M6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubl3Q9Z2M6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ubl3Q9Z2M6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ubl3Q9Z2M6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ubl3Q9Z2M6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.59■□□□□ 0.73
Ubl3Q9Z2M6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ubl3Q9Z2M6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms