Protein–RNA interactions for Protein: Q9JJN2

Zfhx4, Zinc finger homeobox protein 4, mousemouse

Predictions only

Length 3,550 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfhx4Q9JJN2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zfhx4Q9JJN2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zfhx4Q9JJN2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zfhx4Q9JJN2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.16■□□□□ 0.98
Zfhx4Q9JJN2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zfhx4Q9JJN2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zfhx4Q9JJN2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.16■□□□□ 0.98
Zfhx4Q9JJN2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zfhx4Q9JJN2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.14■□□□□ 0.97
Zfhx4Q9JJN2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zfhx4Q9JJN2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Zfhx4Q9JJN2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.13■□□□□ 0.97
Zfhx4Q9JJN2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.13■□□□□ 0.97
Zfhx4Q9JJN2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Zfhx4Q9JJN2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zfhx4Q9JJN2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zfhx4Q9JJN2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zfhx4Q9JJN2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zfhx4Q9JJN2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zfhx4Q9JJN2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Zfhx4Q9JJN2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Zfhx4Q9JJN2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zfhx4Q9JJN2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Zfhx4Q9JJN2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zfhx4Q9JJN2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zfhx4Q9JJN2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zfhx4Q9JJN2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Zfhx4Q9JJN2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zfhx4Q9JJN2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Zfhx4Q9JJN2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zfhx4Q9JJN2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zfhx4Q9JJN2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zfhx4Q9JJN2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zfhx4Q9JJN2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.09■□□□□ 0.97
Zfhx4Q9JJN2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zfhx4Q9JJN2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.08■□□□□ 0.97
Zfhx4Q9JJN2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Zfhx4Q9JJN2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zfhx4Q9JJN2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zfhx4Q9JJN2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zfhx4Q9JJN2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Zfhx4Q9JJN2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.06■□□□□ 0.96
Zfhx4Q9JJN2 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.06■□□□□ 0.96
Zfhx4Q9JJN2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Zfhx4Q9JJN2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zfhx4Q9JJN2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Zfhx4Q9JJN2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.05■□□□□ 0.96
Zfhx4Q9JJN2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zfhx4Q9JJN2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zfhx4Q9JJN2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zfhx4Q9JJN2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zfhx4Q9JJN2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zfhx4Q9JJN2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zfhx4Q9JJN2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.04■□□□□ 0.96
Zfhx4Q9JJN2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zfhx4Q9JJN2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zfhx4Q9JJN2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Zfhx4Q9JJN2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zfhx4Q9JJN2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Zfhx4Q9JJN2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zfhx4Q9JJN2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Zfhx4Q9JJN2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Zfhx4Q9JJN2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Zfhx4Q9JJN2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Zfhx4Q9JJN2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Zfhx4Q9JJN2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Zfhx4Q9JJN2 Gm9847-201ENSMUST00000052528 599 ntBASIC21.01■□□□□ 0.95
Zfhx4Q9JJN2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Zfhx4Q9JJN2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Zfhx4Q9JJN2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Zfhx4Q9JJN2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Zfhx4Q9JJN2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zfhx4Q9JJN2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Zfhx4Q9JJN2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.99■□□□□ 0.95
Zfhx4Q9JJN2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.99■□□□□ 0.95
Zfhx4Q9JJN2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.99■□□□□ 0.95
Zfhx4Q9JJN2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.98■□□□□ 0.95
Zfhx4Q9JJN2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zfhx4Q9JJN2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Zfhx4Q9JJN2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zfhx4Q9JJN2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zfhx4Q9JJN2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Zfhx4Q9JJN2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zfhx4Q9JJN2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Zfhx4Q9JJN2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Zfhx4Q9JJN2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.97■□□□□ 0.95
Zfhx4Q9JJN2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zfhx4Q9JJN2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zfhx4Q9JJN2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.97■□□□□ 0.95
Zfhx4Q9JJN2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Zfhx4Q9JJN2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Zfhx4Q9JJN2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zfhx4Q9JJN2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zfhx4Q9JJN2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zfhx4Q9JJN2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zfhx4Q9JJN2 Gm27454-201ENSMUST00000185090 204 ntBASIC20.95■□□□□ 0.94
Zfhx4Q9JJN2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Zfhx4Q9JJN2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.94■□□□□ 0.94
Zfhx4Q9JJN2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Zfhx4Q9JJN2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms