Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Nkx2-4Q9EQM3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.47■■□□□ 1.35
Nkx2-4Q9EQM3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Nkx2-4Q9EQM3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Nkx2-4Q9EQM3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Nkx2-4Q9EQM3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Nkx2-4Q9EQM3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Nkx2-4Q9EQM3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.45■■□□□ 1.34
Nkx2-4Q9EQM3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.44■■□□□ 1.34
Nkx2-4Q9EQM3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Nkx2-4Q9EQM3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nkx2-4Q9EQM3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.42■■□□□ 1.34
Nkx2-4Q9EQM3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.42■■□□□ 1.34
Nkx2-4Q9EQM3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.42■■□□□ 1.34
Nkx2-4Q9EQM3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Nkx2-4Q9EQM3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Nkx2-4Q9EQM3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nkx2-4Q9EQM3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Nkx2-4Q9EQM3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.41■■□□□ 1.34
Nkx2-4Q9EQM3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Nkx2-4Q9EQM3 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.41■■□□□ 1.34
Nkx2-4Q9EQM3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nkx2-4Q9EQM3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.4■■□□□ 1.34
Nkx2-4Q9EQM3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nkx2-4Q9EQM3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Nkx2-4Q9EQM3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Nkx2-4Q9EQM3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Nkx2-4Q9EQM3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nkx2-4Q9EQM3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nkx2-4Q9EQM3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.38■■□□□ 1.33
Nkx2-4Q9EQM3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.38■■□□□ 1.33
Nkx2-4Q9EQM3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nkx2-4Q9EQM3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.37■■□□□ 1.33
Nkx2-4Q9EQM3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Nkx2-4Q9EQM3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nkx2-4Q9EQM3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nkx2-4Q9EQM3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nkx2-4Q9EQM3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Nkx2-4Q9EQM3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nkx2-4Q9EQM3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Nkx2-4Q9EQM3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Nkx2-4Q9EQM3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-4Q9EQM3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nkx2-4Q9EQM3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Nkx2-4Q9EQM3 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.35■■□□□ 1.33
Nkx2-4Q9EQM3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Nkx2-4Q9EQM3 Gm13241-201ENSMUST00000094493 780 ntBASIC23.35■■□□□ 1.33
Nkx2-4Q9EQM3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Nkx2-4Q9EQM3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nkx2-4Q9EQM3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-4Q9EQM3 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.33■■□□□ 1.33
Nkx2-4Q9EQM3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.33■■□□□ 1.33
Nkx2-4Q9EQM3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-4Q9EQM3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Nkx2-4Q9EQM3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Nkx2-4Q9EQM3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.32■■□□□ 1.32
Nkx2-4Q9EQM3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-4Q9EQM3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-4Q9EQM3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-4Q9EQM3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Nkx2-4Q9EQM3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Nkx2-4Q9EQM3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Nkx2-4Q9EQM3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Nkx2-4Q9EQM3 Gm7417-201ENSMUST00000192950 473 ntBASIC23.3■■□□□ 1.32
Nkx2-4Q9EQM3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Nkx2-4Q9EQM3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nkx2-4Q9EQM3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nkx2-4Q9EQM3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.29■■□□□ 1.32
Nkx2-4Q9EQM3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nkx2-4Q9EQM3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Nkx2-4Q9EQM3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nkx2-4Q9EQM3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Nkx2-4Q9EQM3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Nkx2-4Q9EQM3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Nkx2-4Q9EQM3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Nkx2-4Q9EQM3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nkx2-4Q9EQM3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.27■■□□□ 1.32
Nkx2-4Q9EQM3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Nkx2-4Q9EQM3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Nkx2-4Q9EQM3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Nkx2-4Q9EQM3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nkx2-4Q9EQM3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Nkx2-4Q9EQM3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
Nkx2-4Q9EQM3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.25■■□□□ 1.31
Nkx2-4Q9EQM3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.25■■□□□ 1.31
Nkx2-4Q9EQM3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nkx2-4Q9EQM3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Nkx2-4Q9EQM3 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.24■■□□□ 1.31
Nkx2-4Q9EQM3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nkx2-4Q9EQM3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Nkx2-4Q9EQM3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.23■■□□□ 1.31
Nkx2-4Q9EQM3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Nkx2-4Q9EQM3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.23■■□□□ 1.31
Nkx2-4Q9EQM3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.23■■□□□ 1.31
Nkx2-4Q9EQM3 Gm9847-201ENSMUST00000052528 599 ntBASIC23.23■■□□□ 1.31
Nkx2-4Q9EQM3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nkx2-4Q9EQM3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nkx2-4Q9EQM3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Nkx2-4Q9EQM3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Nkx2-4Q9EQM3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms