Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Lysmd1Q9D0E3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Lysmd1Q9D0E3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Lysmd1Q9D0E3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lysmd1Q9D0E3 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.03■■□□□ 1.6
Lysmd1Q9D0E3 Gm12922-201ENSMUST00000120626 809 ntBASIC25.02■■□□□ 1.6
Lysmd1Q9D0E3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Lysmd1Q9D0E3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Lysmd1Q9D0E3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC25.01■■□□□ 1.59
Lysmd1Q9D0E3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Lysmd1Q9D0E3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Lysmd1Q9D0E3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Lysmd1Q9D0E3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Lysmd1Q9D0E3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC25■■□□□ 1.59
Lysmd1Q9D0E3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
Lysmd1Q9D0E3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC25■■□□□ 1.59
Lysmd1Q9D0E3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
Lysmd1Q9D0E3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Lysmd1Q9D0E3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Lysmd1Q9D0E3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Lysmd1Q9D0E3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Lysmd1Q9D0E3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.99■■□□□ 1.59
Lysmd1Q9D0E3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Lysmd1Q9D0E3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.99■■□□□ 1.59
Lysmd1Q9D0E3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC24.99■■□□□ 1.59
Lysmd1Q9D0E3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.99■■□□□ 1.59
Lysmd1Q9D0E3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Lysmd1Q9D0E3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Lysmd1Q9D0E3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Lysmd1Q9D0E3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
Lysmd1Q9D0E3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.98■■□□□ 1.59
Lysmd1Q9D0E3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Lysmd1Q9D0E3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Lysmd1Q9D0E3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.97■■□□□ 1.59
Lysmd1Q9D0E3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lysmd1Q9D0E3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lysmd1Q9D0E3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.97■■□□□ 1.59
Lysmd1Q9D0E3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.97■■□□□ 1.59
Lysmd1Q9D0E3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lysmd1Q9D0E3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lysmd1Q9D0E3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.96■■□□□ 1.59
Lysmd1Q9D0E3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
Lysmd1Q9D0E3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
Lysmd1Q9D0E3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Lysmd1Q9D0E3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Lysmd1Q9D0E3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Lysmd1Q9D0E3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.94■■□□□ 1.58
Lysmd1Q9D0E3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Lysmd1Q9D0E3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Lysmd1Q9D0E3 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.94■■□□□ 1.58
Lysmd1Q9D0E3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Lysmd1Q9D0E3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Lysmd1Q9D0E3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
Lysmd1Q9D0E3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC24.93■■□□□ 1.58
Lysmd1Q9D0E3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Lysmd1Q9D0E3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lysmd1Q9D0E3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.92■■□□□ 1.58
Lysmd1Q9D0E3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lysmd1Q9D0E3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.91■■□□□ 1.58
Lysmd1Q9D0E3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Lysmd1Q9D0E3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.91■■□□□ 1.58
Lysmd1Q9D0E3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Lysmd1Q9D0E3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC24.9■■□□□ 1.58
Lysmd1Q9D0E3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Lysmd1Q9D0E3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Lysmd1Q9D0E3 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.88■■□□□ 1.57
Lysmd1Q9D0E3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Lysmd1Q9D0E3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Lysmd1Q9D0E3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Lysmd1Q9D0E3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.87■■□□□ 1.57
Lysmd1Q9D0E3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Lysmd1Q9D0E3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Lysmd1Q9D0E3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Lysmd1Q9D0E3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
Lysmd1Q9D0E3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.86■■□□□ 1.57
Lysmd1Q9D0E3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.86■■□□□ 1.57
Lysmd1Q9D0E3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Lysmd1Q9D0E3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Lysmd1Q9D0E3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Lysmd1Q9D0E3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Lysmd1Q9D0E3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Lysmd1Q9D0E3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Lysmd1Q9D0E3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
Lysmd1Q9D0E3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Lysmd1Q9D0E3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.84■■□□□ 1.57
Lysmd1Q9D0E3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.84■■□□□ 1.57
Lysmd1Q9D0E3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Lysmd1Q9D0E3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Lysmd1Q9D0E3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.83■■□□□ 1.57
Lysmd1Q9D0E3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.83■■□□□ 1.57
Lysmd1Q9D0E3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.83■■□□□ 1.57
Lysmd1Q9D0E3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Lysmd1Q9D0E3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.82■■□□□ 1.56
Lysmd1Q9D0E3 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.82■■□□□ 1.56
Lysmd1Q9D0E3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Lysmd1Q9D0E3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Lysmd1Q9D0E3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.81■■□□□ 1.56
Lysmd1Q9D0E3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Lysmd1Q9D0E3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.8■■□□□ 1.56
Lysmd1Q9D0E3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms