Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Q9CR55 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q9CR55 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Q9CR55 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Q9CR55 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q9CR55 Gm45855-201ENSMUST00000212546 880 ntBASIC20.51■□□□□ 0.87
Q9CR55 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Q9CR55 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q9CR55 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q9CR55 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
Q9CR55 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q9CR55 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Q9CR55 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Q9CR55 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Q9CR55 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q9CR55 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q9CR55 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q9CR55 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q9CR55 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q9CR55 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q9CR55 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q9CR55 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q9CR55 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Q9CR55 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q9CR55 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Q9CR55 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q9CR55 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.47■□□□□ 0.87
Q9CR55 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q9CR55 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q9CR55 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q9CR55 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Q9CR55 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q9CR55 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q9CR55 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Q9CR55 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q9CR55 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Q9CR55 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q9CR55 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q9CR55 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Q9CR55 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q9CR55 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q9CR55 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q9CR55 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.42■□□□□ 0.86
Q9CR55 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q9CR55 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q9CR55 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q9CR55 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q9CR55 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Q9CR55 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q9CR55 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q9CR55 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.4■□□□□ 0.86
Q9CR55 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Q9CR55 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Q9CR55 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q9CR55 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.4■□□□□ 0.86
Q9CR55 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q9CR55 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.39■□□□□ 0.86
Q9CR55 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Q9CR55 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Q9CR55 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q9CR55 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q9CR55 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q9CR55 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q9CR55 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.38■□□□□ 0.85
Q9CR55 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q9CR55 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Q9CR55 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q9CR55 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.38■□□□□ 0.85
Q9CR55 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.38■□□□□ 0.85
Q9CR55 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q9CR55 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q9CR55 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Q9CR55 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q9CR55 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Q9CR55 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q9CR55 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.37■□□□□ 0.85
Q9CR55 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CR55 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CR55 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CR55 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q9CR55 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9CR55 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Q9CR55 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Q9CR55 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Q9CR55 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9CR55 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Q9CR55 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.35■□□□□ 0.85
Q9CR55 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q9CR55 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.34■□□□□ 0.85
Q9CR55 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q9CR55 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q9CR55 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q9CR55 Gm9397-201ENSMUST00000200125 605 ntBASIC20.34■□□□□ 0.85
Q9CR55 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Q9CR55 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q9CR55 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Q9CR55 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Q9CR55 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.33■□□□□ 0.85
Q9CR55 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Q9CR55 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms