Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Top1mtQ8R4U6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Top1mtQ8R4U6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Top1mtQ8R4U6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Top1mtQ8R4U6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Top1mtQ8R4U6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Top1mtQ8R4U6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Top1mtQ8R4U6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Top1mtQ8R4U6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
Top1mtQ8R4U6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Top1mtQ8R4U6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.71■■□□□ 1.87
Top1mtQ8R4U6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Top1mtQ8R4U6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Top1mtQ8R4U6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Top1mtQ8R4U6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Top1mtQ8R4U6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
Top1mtQ8R4U6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.7■■□□□ 1.87
Top1mtQ8R4U6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Top1mtQ8R4U6 Scarna2-201ENSMUST00000157560 414 ntBASIC26.7■■□□□ 1.86
Top1mtQ8R4U6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Top1mtQ8R4U6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Top1mtQ8R4U6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.69■■□□□ 1.86
Top1mtQ8R4U6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Top1mtQ8R4U6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Top1mtQ8R4U6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Top1mtQ8R4U6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Top1mtQ8R4U6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Top1mtQ8R4U6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
Top1mtQ8R4U6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Top1mtQ8R4U6 Gm9806-201ENSMUST00000051080 552 ntBASIC26.66■■□□□ 1.86
Top1mtQ8R4U6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Top1mtQ8R4U6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Top1mtQ8R4U6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Gm16437-201ENSMUST00000025669 507 ntBASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.65■■□□□ 1.86
Top1mtQ8R4U6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Top1mtQ8R4U6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Top1mtQ8R4U6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Top1mtQ8R4U6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.63■■□□□ 1.85
Top1mtQ8R4U6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Top1mtQ8R4U6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Top1mtQ8R4U6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.63■■□□□ 1.85
Top1mtQ8R4U6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Top1mtQ8R4U6 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.62■■□□□ 1.85
Top1mtQ8R4U6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Top1mtQ8R4U6 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.62■■□□□ 1.85
Top1mtQ8R4U6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Top1mtQ8R4U6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.62■■□□□ 1.85
Top1mtQ8R4U6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Top1mtQ8R4U6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
Top1mtQ8R4U6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Top1mtQ8R4U6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Top1mtQ8R4U6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Top1mtQ8R4U6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Top1mtQ8R4U6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Top1mtQ8R4U6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Top1mtQ8R4U6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Top1mtQ8R4U6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Top1mtQ8R4U6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Top1mtQ8R4U6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Top1mtQ8R4U6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.59■■□□□ 1.85
Top1mtQ8R4U6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Top1mtQ8R4U6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Top1mtQ8R4U6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.58■■□□□ 1.85
Top1mtQ8R4U6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Top1mtQ8R4U6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Top1mtQ8R4U6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Top1mtQ8R4U6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Top1mtQ8R4U6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Top1mtQ8R4U6 Gm11687-201ENSMUST00000118911 886 ntBASIC26.56■■□□□ 1.84
Top1mtQ8R4U6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Top1mtQ8R4U6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.56■■□□□ 1.84
Top1mtQ8R4U6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Top1mtQ8R4U6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Top1mtQ8R4U6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
Top1mtQ8R4U6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Top1mtQ8R4U6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Top1mtQ8R4U6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Top1mtQ8R4U6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.54■■□□□ 1.84
Top1mtQ8R4U6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Top1mtQ8R4U6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Top1mtQ8R4U6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.53■■□□□ 1.84
Top1mtQ8R4U6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Top1mtQ8R4U6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Top1mtQ8R4U6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Top1mtQ8R4U6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Top1mtQ8R4U6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Top1mtQ8R4U6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Top1mtQ8R4U6 Gm44428-201ENSMUST00000204474 874 ntBASIC26.51■■□□□ 1.83
Top1mtQ8R4U6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Top1mtQ8R4U6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.5■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms