Protein–RNA interactions for Protein: Q8K2X2

Rbm48, RNA-binding protein 48, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm48Q8K2X2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm48Q8K2X2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm48Q8K2X2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm48Q8K2X2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm48Q8K2X2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rbm48Q8K2X2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm48Q8K2X2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm48Q8K2X2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm48Q8K2X2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm48Q8K2X2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm48Q8K2X2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rbm48Q8K2X2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Rbm48Q8K2X2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm48Q8K2X2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm48Q8K2X2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm48Q8K2X2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm48Q8K2X2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm48Q8K2X2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm48Q8K2X2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm48Q8K2X2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm48Q8K2X2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rbm48Q8K2X2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm48Q8K2X2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm48Q8K2X2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm48Q8K2X2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm48Q8K2X2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm48Q8K2X2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm48Q8K2X2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rbm48Q8K2X2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm48Q8K2X2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm48Q8K2X2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.6■□□□□ 0.57
Rbm48Q8K2X2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm48Q8K2X2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.59■□□□□ 0.57
Rbm48Q8K2X2 Particl-201ENSMUST00000205370 1560 ntBASIC18.59■□□□□ 0.57
Rbm48Q8K2X2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rbm48Q8K2X2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rbm48Q8K2X2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.58■□□□□ 0.57
Rbm48Q8K2X2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Rbm48Q8K2X2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm48Q8K2X2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rbm48Q8K2X2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm48Q8K2X2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm48Q8K2X2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm48Q8K2X2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm48Q8K2X2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm48Q8K2X2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rbm48Q8K2X2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm48Q8K2X2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm48Q8K2X2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm48Q8K2X2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm48Q8K2X2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm48Q8K2X2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Rbm48Q8K2X2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm48Q8K2X2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm48Q8K2X2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rbm48Q8K2X2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbm48Q8K2X2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rbm48Q8K2X2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Rbm48Q8K2X2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbm48Q8K2X2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbm48Q8K2X2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rbm48Q8K2X2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rbm48Q8K2X2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.52■□□□□ 0.56
Rbm48Q8K2X2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rbm48Q8K2X2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rbm48Q8K2X2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.52■□□□□ 0.56
Rbm48Q8K2X2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rbm48Q8K2X2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rbm48Q8K2X2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rbm48Q8K2X2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Rbm48Q8K2X2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rbm48Q8K2X2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rbm48Q8K2X2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rbm48Q8K2X2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rbm48Q8K2X2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.5■□□□□ 0.55
Rbm48Q8K2X2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbm48Q8K2X2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbm48Q8K2X2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbm48Q8K2X2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rbm48Q8K2X2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms