Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Zc3h3Q8CHP0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Zc3h3Q8CHP0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Zc3h3Q8CHP0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Zc3h3Q8CHP0 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.49■■□□□ 1.19
Zc3h3Q8CHP0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.48■■□□□ 1.19
Zc3h3Q8CHP0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.48■■□□□ 1.19
Zc3h3Q8CHP0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zc3h3Q8CHP0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zc3h3Q8CHP0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.48■■□□□ 1.19
Zc3h3Q8CHP0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Zc3h3Q8CHP0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.48■■□□□ 1.19
Zc3h3Q8CHP0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zc3h3Q8CHP0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zc3h3Q8CHP0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Zc3h3Q8CHP0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Zc3h3Q8CHP0 Gm21956-201ENSMUST00000179946 522 ntBASIC22.47■■□□□ 1.19
Zc3h3Q8CHP0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Zc3h3Q8CHP0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Zc3h3Q8CHP0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Zc3h3Q8CHP0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.46■■□□□ 1.19
Zc3h3Q8CHP0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.46■■□□□ 1.19
Zc3h3Q8CHP0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zc3h3Q8CHP0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.46■■□□□ 1.19
Zc3h3Q8CHP0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Zc3h3Q8CHP0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.45■■□□□ 1.18
Zc3h3Q8CHP0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Zc3h3Q8CHP0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Zc3h3Q8CHP0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Zc3h3Q8CHP0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Zc3h3Q8CHP0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Zc3h3Q8CHP0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Zc3h3Q8CHP0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Zc3h3Q8CHP0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Zc3h3Q8CHP0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Zc3h3Q8CHP0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Zc3h3Q8CHP0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
Zc3h3Q8CHP0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Zc3h3Q8CHP0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zc3h3Q8CHP0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Zc3h3Q8CHP0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zc3h3Q8CHP0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.41■■□□□ 1.18
Zc3h3Q8CHP0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Zc3h3Q8CHP0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Zc3h3Q8CHP0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.4■■□□□ 1.18
Zc3h3Q8CHP0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Zc3h3Q8CHP0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Zc3h3Q8CHP0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.4■■□□□ 1.18
Zc3h3Q8CHP0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Zc3h3Q8CHP0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Zc3h3Q8CHP0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Zc3h3Q8CHP0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Zc3h3Q8CHP0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Zc3h3Q8CHP0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Zc3h3Q8CHP0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.37■■□□□ 1.17
Zc3h3Q8CHP0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Zc3h3Q8CHP0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Zc3h3Q8CHP0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Zc3h3Q8CHP0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Zc3h3Q8CHP0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Zc3h3Q8CHP0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Zc3h3Q8CHP0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Zc3h3Q8CHP0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.35■■□□□ 1.17
Zc3h3Q8CHP0 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.35■■□□□ 1.17
Zc3h3Q8CHP0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Zc3h3Q8CHP0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Zc3h3Q8CHP0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.34■■□□□ 1.17
Zc3h3Q8CHP0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.34■■□□□ 1.17
Zc3h3Q8CHP0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zc3h3Q8CHP0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Zc3h3Q8CHP0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Zc3h3Q8CHP0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Zc3h3Q8CHP0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Zc3h3Q8CHP0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Zc3h3Q8CHP0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Zc3h3Q8CHP0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.32■■□□□ 1.16
Zc3h3Q8CHP0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Zc3h3Q8CHP0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Zc3h3Q8CHP0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Zc3h3Q8CHP0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zc3h3Q8CHP0 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.3■■□□□ 1.16
Zc3h3Q8CHP0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
Zc3h3Q8CHP0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.29■■□□□ 1.16
Zc3h3Q8CHP0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.29■■□□□ 1.16
Zc3h3Q8CHP0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h3Q8CHP0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h3Q8CHP0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Zc3h3Q8CHP0 Gm22238-201ENSMUST00000175222 88 ntBASIC22.28■■□□□ 1.16
Zc3h3Q8CHP0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.28■■□□□ 1.16
Zc3h3Q8CHP0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h3Q8CHP0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h3Q8CHP0 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.27■■□□□ 1.16
Zc3h3Q8CHP0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h3Q8CHP0 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.26■■□□□ 1.15
Zc3h3Q8CHP0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h3Q8CHP0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h3Q8CHP0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h3Q8CHP0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.25■■□□□ 1.15
Zc3h3Q8CHP0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h3Q8CHP0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms