Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rbm28Q8CGC6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.34■■□□□ 1.81
Rbm28Q8CGC6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rbm28Q8CGC6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rbm28Q8CGC6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rbm28Q8CGC6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.33■■□□□ 1.81
Rbm28Q8CGC6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rbm28Q8CGC6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rbm28Q8CGC6 Gm5921-201ENSMUST00000075898 882 ntBASIC26.32■■□□□ 1.8
Rbm28Q8CGC6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rbm28Q8CGC6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rbm28Q8CGC6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rbm28Q8CGC6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rbm28Q8CGC6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Rbm28Q8CGC6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rbm28Q8CGC6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rbm28Q8CGC6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rbm28Q8CGC6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rbm28Q8CGC6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Rbm28Q8CGC6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.28■■□□□ 1.8
Rbm28Q8CGC6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.28■■□□□ 1.8
Rbm28Q8CGC6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rbm28Q8CGC6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rbm28Q8CGC6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rbm28Q8CGC6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rbm28Q8CGC6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.27■■□□□ 1.8
Rbm28Q8CGC6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rbm28Q8CGC6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.27■■□□□ 1.8
Rbm28Q8CGC6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rbm28Q8CGC6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rbm28Q8CGC6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Rbm28Q8CGC6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rbm28Q8CGC6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rbm28Q8CGC6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rbm28Q8CGC6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rbm28Q8CGC6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rbm28Q8CGC6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rbm28Q8CGC6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Rbm28Q8CGC6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rbm28Q8CGC6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rbm28Q8CGC6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rbm28Q8CGC6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Rbm28Q8CGC6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rbm28Q8CGC6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.23■■□□□ 1.79
Rbm28Q8CGC6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rbm28Q8CGC6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rbm28Q8CGC6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rbm28Q8CGC6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rbm28Q8CGC6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rbm28Q8CGC6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rbm28Q8CGC6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rbm28Q8CGC6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rbm28Q8CGC6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.21■■□□□ 1.79
Rbm28Q8CGC6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rbm28Q8CGC6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Rbm28Q8CGC6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rbm28Q8CGC6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rbm28Q8CGC6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rbm28Q8CGC6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Rbm28Q8CGC6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rbm28Q8CGC6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Rbm28Q8CGC6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rbm28Q8CGC6 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.19■■□□□ 1.78
Rbm28Q8CGC6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rbm28Q8CGC6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rbm28Q8CGC6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rbm28Q8CGC6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Rbm28Q8CGC6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rbm28Q8CGC6 Gm5812-201ENSMUST00000061073 957 ntBASIC26.16■■□□□ 1.78
Rbm28Q8CGC6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rbm28Q8CGC6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Rbm28Q8CGC6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rbm28Q8CGC6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rbm28Q8CGC6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rbm28Q8CGC6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Rbm28Q8CGC6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rbm28Q8CGC6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Rbm28Q8CGC6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rbm28Q8CGC6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Rbm28Q8CGC6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.13■■□□□ 1.77
Rbm28Q8CGC6 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.13■■□□□ 1.77
Rbm28Q8CGC6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
Rbm28Q8CGC6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rbm28Q8CGC6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.12■■□□□ 1.77
Rbm28Q8CGC6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rbm28Q8CGC6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rbm28Q8CGC6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rbm28Q8CGC6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Rbm28Q8CGC6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.11■■□□□ 1.77
Rbm28Q8CGC6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Rbm28Q8CGC6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rbm28Q8CGC6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rbm28Q8CGC6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rbm28Q8CGC6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rbm28Q8CGC6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.1■■□□□ 1.77
Rbm28Q8CGC6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Rbm28Q8CGC6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rbm28Q8CGC6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rbm28Q8CGC6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.09■■□□□ 1.77
Rbm28Q8CGC6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms