Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
SynpoQ8CC35 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SynpoQ8CC35 Gm7332-201ENSMUST00000118351 454 ntBASIC21.36■■□□□ 1.01
SynpoQ8CC35 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SynpoQ8CC35 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SynpoQ8CC35 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SynpoQ8CC35 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SynpoQ8CC35 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SynpoQ8CC35 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SynpoQ8CC35 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SynpoQ8CC35 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SynpoQ8CC35 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SynpoQ8CC35 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SynpoQ8CC35 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SynpoQ8CC35 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SynpoQ8CC35 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.34■■□□□ 1.01
SynpoQ8CC35 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SynpoQ8CC35 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
SynpoQ8CC35 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SynpoQ8CC35 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SynpoQ8CC35 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SynpoQ8CC35 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.33■■□□□ 1.01
SynpoQ8CC35 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SynpoQ8CC35 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.33■■□□□ 1
SynpoQ8CC35 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SynpoQ8CC35 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SynpoQ8CC35 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SynpoQ8CC35 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SynpoQ8CC35 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SynpoQ8CC35 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SynpoQ8CC35 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SynpoQ8CC35 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.32■■□□□ 1
SynpoQ8CC35 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SynpoQ8CC35 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.31■■□□□ 1
SynpoQ8CC35 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SynpoQ8CC35 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.31■■□□□ 1
SynpoQ8CC35 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SynpoQ8CC35 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.31■■□□□ 1
SynpoQ8CC35 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SynpoQ8CC35 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SynpoQ8CC35 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.31■■□□□ 1
SynpoQ8CC35 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SynpoQ8CC35 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.3■■□□□ 1
SynpoQ8CC35 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SynpoQ8CC35 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.3■■□□□ 1
SynpoQ8CC35 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.3■■□□□ 1
SynpoQ8CC35 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.3■■□□□ 1
SynpoQ8CC35 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.3■■□□□ 1
SynpoQ8CC35 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SynpoQ8CC35 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SynpoQ8CC35 Gm14523-201ENSMUST00000117260 558 ntBASIC21.29■■□□□ 1
SynpoQ8CC35 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.29■■□□□ 1
SynpoQ8CC35 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SynpoQ8CC35 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SynpoQ8CC35 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.28■■□□□ 1
SynpoQ8CC35 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.28■■□□□ 1
SynpoQ8CC35 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
SynpoQ8CC35 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SynpoQ8CC35 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SynpoQ8CC35 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SynpoQ8CC35 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SynpoQ8CC35 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SynpoQ8CC35 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SynpoQ8CC35 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.27■■□□□ 1
SynpoQ8CC35 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SynpoQ8CC35 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
SynpoQ8CC35 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.27■■□□□ 1
SynpoQ8CC35 Terc-201ENSMUST00000082862 423 ntBASIC21.27■■□□□ 1
SynpoQ8CC35 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
SynpoQ8CC35 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SynpoQ8CC35 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SynpoQ8CC35 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.26■□□□□ 0.99
SynpoQ8CC35 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SynpoQ8CC35 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.25■□□□□ 0.99
SynpoQ8CC35 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.25■□□□□ 0.99
SynpoQ8CC35 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SynpoQ8CC35 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.25■□□□□ 0.99
SynpoQ8CC35 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SynpoQ8CC35 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.24■□□□□ 0.99
SynpoQ8CC35 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SynpoQ8CC35 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SynpoQ8CC35 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SynpoQ8CC35 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SynpoQ8CC35 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SynpoQ8CC35 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SynpoQ8CC35 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SynpoQ8CC35 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SynpoQ8CC35 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SynpoQ8CC35 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SynpoQ8CC35 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.22■□□□□ 0.99
SynpoQ8CC35 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
SynpoQ8CC35 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SynpoQ8CC35 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SynpoQ8CC35 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SynpoQ8CC35 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SynpoQ8CC35 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SynpoQ8CC35 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SynpoQ8CC35 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.21■□□□□ 0.99
SynpoQ8CC35 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SynpoQ8CC35 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms