Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.6■■□□□ 1.05
Pcdh20Q8BIZ0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh20Q8BIZ0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Pcdh20Q8BIZ0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
Pcdh20Q8BIZ0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdh20Q8BIZ0 Mir3960-201ENSMUST00000198213 73 ntBASIC21.59■■□□□ 1.05
Pcdh20Q8BIZ0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh20Q8BIZ0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
Pcdh20Q8BIZ0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh20Q8BIZ0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh20Q8BIZ0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh20Q8BIZ0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdh20Q8BIZ0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdh20Q8BIZ0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.58■■□□□ 1.05
Pcdh20Q8BIZ0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh20Q8BIZ0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh20Q8BIZ0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdh20Q8BIZ0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdh20Q8BIZ0 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.58■■□□□ 1.04
Pcdh20Q8BIZ0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh20Q8BIZ0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
Pcdh20Q8BIZ0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh20Q8BIZ0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh20Q8BIZ0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh20Q8BIZ0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh20Q8BIZ0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh20Q8BIZ0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.56■■□□□ 1.04
Pcdh20Q8BIZ0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh20Q8BIZ0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.55■■□□□ 1.04
Pcdh20Q8BIZ0 Mir6538-201ENSMUST00000183713 110 ntBASIC21.55■■□□□ 1.04
Pcdh20Q8BIZ0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh20Q8BIZ0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh20Q8BIZ0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh20Q8BIZ0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh20Q8BIZ0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh20Q8BIZ0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh20Q8BIZ0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh20Q8BIZ0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdh20Q8BIZ0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.53■■□□□ 1.04
Pcdh20Q8BIZ0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh20Q8BIZ0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Pcdh20Q8BIZ0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh20Q8BIZ0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh20Q8BIZ0 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.53■■□□□ 1.04
Pcdh20Q8BIZ0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh20Q8BIZ0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcdh20Q8BIZ0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh20Q8BIZ0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh20Q8BIZ0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh20Q8BIZ0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh20Q8BIZ0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh20Q8BIZ0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh20Q8BIZ0 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.51■■□□□ 1.03
Pcdh20Q8BIZ0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh20Q8BIZ0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh20Q8BIZ0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh20Q8BIZ0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh20Q8BIZ0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh20Q8BIZ0 Gm11175-201ENSMUST00000116172 543 ntBASIC21.5■■□□□ 1.03
Pcdh20Q8BIZ0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdh20Q8BIZ0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh20Q8BIZ0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh20Q8BIZ0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdh20Q8BIZ0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh20Q8BIZ0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
Pcdh20Q8BIZ0 Gm45364-201ENSMUST00000210883 159 ntBASIC21.49■■□□□ 1.03
Pcdh20Q8BIZ0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh20Q8BIZ0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh20Q8BIZ0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh20Q8BIZ0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh20Q8BIZ0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh20Q8BIZ0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
Pcdh20Q8BIZ0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh20Q8BIZ0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh20Q8BIZ0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh20Q8BIZ0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh20Q8BIZ0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.48■■□□□ 1.03
Pcdh20Q8BIZ0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh20Q8BIZ0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh20Q8BIZ0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh20Q8BIZ0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh20Q8BIZ0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdh20Q8BIZ0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh20Q8BIZ0 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.47■■□□□ 1.03
Pcdh20Q8BIZ0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdh20Q8BIZ0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh20Q8BIZ0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh20Q8BIZ0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Pcdh20Q8BIZ0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh20Q8BIZ0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh20Q8BIZ0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh20Q8BIZ0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdh20Q8BIZ0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh20Q8BIZ0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh20Q8BIZ0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdh20Q8BIZ0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh20Q8BIZ0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh20Q8BIZ0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Pcdh20Q8BIZ0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh20Q8BIZ0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms