Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc28Q80XJ3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ttc28Q80XJ3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ttc28Q80XJ3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ttc28Q80XJ3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ttc28Q80XJ3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ttc28Q80XJ3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ttc28Q80XJ3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc28Q80XJ3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc28Q80XJ3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc28Q80XJ3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc28Q80XJ3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc28Q80XJ3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.17■□□□□ 0.66
Ttc28Q80XJ3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc28Q80XJ3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ttc28Q80XJ3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc28Q80XJ3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ttc28Q80XJ3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Ttc28Q80XJ3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.16■□□□□ 0.66
Ttc28Q80XJ3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc28Q80XJ3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Ttc28Q80XJ3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc28Q80XJ3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.15■□□□□ 0.66
Ttc28Q80XJ3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ttc28Q80XJ3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ttc28Q80XJ3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Ttc28Q80XJ3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ttc28Q80XJ3 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.14■□□□□ 0.65
Ttc28Q80XJ3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ttc28Q80XJ3 Amer2-203ENSMUST00000225247 2662 ntBASIC19.13■□□□□ 0.65
Ttc28Q80XJ3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.13■□□□□ 0.65
Ttc28Q80XJ3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc28Q80XJ3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ttc28Q80XJ3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc28Q80XJ3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ttc28Q80XJ3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc28Q80XJ3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.12■□□□□ 0.65
Ttc28Q80XJ3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
Ttc28Q80XJ3 Etf1-202ENSMUST00000180351 108 ntBASIC19.12■□□□□ 0.65
Ttc28Q80XJ3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ttc28Q80XJ3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc28Q80XJ3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc28Q80XJ3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ttc28Q80XJ3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ttc28Q80XJ3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ttc28Q80XJ3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc28Q80XJ3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc28Q80XJ3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.1■□□□□ 0.65
Ttc28Q80XJ3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ttc28Q80XJ3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.1■□□□□ 0.65
Ttc28Q80XJ3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ttc28Q80XJ3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ttc28Q80XJ3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ttc28Q80XJ3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ttc28Q80XJ3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ttc28Q80XJ3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ttc28Q80XJ3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ttc28Q80XJ3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ttc28Q80XJ3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ttc28Q80XJ3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ttc28Q80XJ3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ttc28Q80XJ3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ttc28Q80XJ3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ttc28Q80XJ3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ttc28Q80XJ3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ttc28Q80XJ3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ttc28Q80XJ3 Gm13241-201ENSMUST00000094493 780 ntBASIC19.07■□□□□ 0.64
Ttc28Q80XJ3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ttc28Q80XJ3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ttc28Q80XJ3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Ttc28Q80XJ3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ttc28Q80XJ3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ttc28Q80XJ3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.06■□□□□ 0.64
Ttc28Q80XJ3 Gm21956-201ENSMUST00000179946 522 ntBASIC19.06■□□□□ 0.64
Ttc28Q80XJ3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ttc28Q80XJ3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ttc28Q80XJ3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.06■□□□□ 0.64
Ttc28Q80XJ3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ttc28Q80XJ3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ttc28Q80XJ3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ttc28Q80XJ3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.05■□□□□ 0.64
Ttc28Q80XJ3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ttc28Q80XJ3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ttc28Q80XJ3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ttc28Q80XJ3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ttc28Q80XJ3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.04■□□□□ 0.64
Ttc28Q80XJ3 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.04■□□□□ 0.64
Ttc28Q80XJ3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms