Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Prpf40bQ80W14 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.73■■□□□ 1.71
Prpf40bQ80W14 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Prpf40bQ80W14 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Prpf40bQ80W14 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Prpf40bQ80W14 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Prpf40bQ80W14 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
Prpf40bQ80W14 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Prpf40bQ80W14 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Prpf40bQ80W14 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Prpf40bQ80W14 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Prpf40bQ80W14 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.69■■□□□ 1.7
Prpf40bQ80W14 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.69■■□□□ 1.7
Prpf40bQ80W14 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Prpf40bQ80W14 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Prpf40bQ80W14 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Prpf40bQ80W14 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Prpf40bQ80W14 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
Prpf40bQ80W14 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Prpf40bQ80W14 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Prpf40bQ80W14 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.67■■□□□ 1.7
Prpf40bQ80W14 Gm9959-201ENSMUST00000068277 390 ntBASIC25.67■■□□□ 1.7
Prpf40bQ80W14 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Prpf40bQ80W14 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Prpf40bQ80W14 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.67■■□□□ 1.7
Prpf40bQ80W14 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Prpf40bQ80W14 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.66■■□□□ 1.7
Prpf40bQ80W14 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Prpf40bQ80W14 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.66■■□□□ 1.7
Prpf40bQ80W14 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Prpf40bQ80W14 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Prpf40bQ80W14 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Prpf40bQ80W14 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Prpf40bQ80W14 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Prpf40bQ80W14 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
Prpf40bQ80W14 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.64■■□□□ 1.69
Prpf40bQ80W14 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Prpf40bQ80W14 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Prpf40bQ80W14 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Prpf40bQ80W14 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Prpf40bQ80W14 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Prpf40bQ80W14 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Prpf40bQ80W14 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
Prpf40bQ80W14 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf40bQ80W14 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf40bQ80W14 Gm45444-201ENSMUST00000211394 898 ntBASIC25.62■■□□□ 1.69
Prpf40bQ80W14 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf40bQ80W14 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf40bQ80W14 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf40bQ80W14 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Prpf40bQ80W14 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Prpf40bQ80W14 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Prpf40bQ80W14 Gm44428-201ENSMUST00000204474 874 ntBASIC25.61■■□□□ 1.69
Prpf40bQ80W14 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Prpf40bQ80W14 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Prpf40bQ80W14 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Prpf40bQ80W14 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prpf40bQ80W14 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Prpf40bQ80W14 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prpf40bQ80W14 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Prpf40bQ80W14 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.6■■□□□ 1.69
Prpf40bQ80W14 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.6■■□□□ 1.69
Prpf40bQ80W14 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prpf40bQ80W14 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Prpf40bQ80W14 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.59■■□□□ 1.69
Prpf40bQ80W14 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Prpf40bQ80W14 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Prpf40bQ80W14 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Prpf40bQ80W14 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Prpf40bQ80W14 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Prpf40bQ80W14 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.58■■□□□ 1.69
Prpf40bQ80W14 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Prpf40bQ80W14 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Prpf40bQ80W14 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Prpf40bQ80W14 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Prpf40bQ80W14 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Prpf40bQ80W14 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
Prpf40bQ80W14 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Prpf40bQ80W14 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Prpf40bQ80W14 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Prpf40bQ80W14 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Prpf40bQ80W14 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.56■■□□□ 1.68
Prpf40bQ80W14 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Prpf40bQ80W14 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.56■■□□□ 1.68
Prpf40bQ80W14 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Prpf40bQ80W14 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Prpf40bQ80W14 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.55■■□□□ 1.68
Prpf40bQ80W14 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Prpf40bQ80W14 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Prpf40bQ80W14 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Prpf40bQ80W14 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.54■■□□□ 1.68
Prpf40bQ80W14 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.54■■□□□ 1.68
Prpf40bQ80W14 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Prpf40bQ80W14 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Prpf40bQ80W14 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Prpf40bQ80W14 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Prpf40bQ80W14 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Prpf40bQ80W14 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Prpf40bQ80W14 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Prpf40bQ80W14 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms