Protein–RNA interactions for Protein: Q6PGA0

Rcor3, REST corepressor 3, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcor3Q6PGA0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rcor3Q6PGA0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rcor3Q6PGA0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rcor3Q6PGA0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rcor3Q6PGA0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rcor3Q6PGA0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rcor3Q6PGA0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcor3Q6PGA0 Gm44428-201ENSMUST00000204474 874 ntBASIC20.74■□□□□ 0.91
Rcor3Q6PGA0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rcor3Q6PGA0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcor3Q6PGA0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcor3Q6PGA0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcor3Q6PGA0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcor3Q6PGA0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcor3Q6PGA0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rcor3Q6PGA0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rcor3Q6PGA0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.73■□□□□ 0.91
Rcor3Q6PGA0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rcor3Q6PGA0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.72■□□□□ 0.91
Rcor3Q6PGA0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Rcor3Q6PGA0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rcor3Q6PGA0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rcor3Q6PGA0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rcor3Q6PGA0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rcor3Q6PGA0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rcor3Q6PGA0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rcor3Q6PGA0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rcor3Q6PGA0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rcor3Q6PGA0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rcor3Q6PGA0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.71■□□□□ 0.91
Rcor3Q6PGA0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rcor3Q6PGA0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcor3Q6PGA0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.7■□□□□ 0.9
Rcor3Q6PGA0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.7■□□□□ 0.9
Rcor3Q6PGA0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.7■□□□□ 0.9
Rcor3Q6PGA0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcor3Q6PGA0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcor3Q6PGA0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.7■□□□□ 0.9
Rcor3Q6PGA0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.7■□□□□ 0.9
Rcor3Q6PGA0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rcor3Q6PGA0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rcor3Q6PGA0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rcor3Q6PGA0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rcor3Q6PGA0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.69■□□□□ 0.9
Rcor3Q6PGA0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rcor3Q6PGA0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rcor3Q6PGA0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rcor3Q6PGA0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.68■□□□□ 0.9
Rcor3Q6PGA0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rcor3Q6PGA0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rcor3Q6PGA0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rcor3Q6PGA0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rcor3Q6PGA0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rcor3Q6PGA0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rcor3Q6PGA0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.66■□□□□ 0.9
Rcor3Q6PGA0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rcor3Q6PGA0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rcor3Q6PGA0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rcor3Q6PGA0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.65■□□□□ 0.9
Rcor3Q6PGA0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rcor3Q6PGA0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rcor3Q6PGA0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rcor3Q6PGA0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rcor3Q6PGA0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rcor3Q6PGA0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rcor3Q6PGA0 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.64■□□□□ 0.89
Rcor3Q6PGA0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rcor3Q6PGA0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rcor3Q6PGA0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.64■□□□□ 0.89
Rcor3Q6PGA0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rcor3Q6PGA0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rcor3Q6PGA0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rcor3Q6PGA0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rcor3Q6PGA0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rcor3Q6PGA0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rcor3Q6PGA0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rcor3Q6PGA0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.62■□□□□ 0.89
Rcor3Q6PGA0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rcor3Q6PGA0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rcor3Q6PGA0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rcor3Q6PGA0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rcor3Q6PGA0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rcor3Q6PGA0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rcor3Q6PGA0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rcor3Q6PGA0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rcor3Q6PGA0 Gm43566-201ENSMUST00000196851 808 ntBASIC20.6■□□□□ 0.89
Rcor3Q6PGA0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rcor3Q6PGA0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rcor3Q6PGA0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rcor3Q6PGA0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rcor3Q6PGA0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rcor3Q6PGA0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rcor3Q6PGA0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rcor3Q6PGA0 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.59■□□□□ 0.89
Rcor3Q6PGA0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rcor3Q6PGA0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rcor3Q6PGA0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rcor3Q6PGA0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rcor3Q6PGA0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rcor3Q6PGA0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms