Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slc46a1Q6PEM8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Slc46a1Q6PEM8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc46a1Q6PEM8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc46a1Q6PEM8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Slc46a1Q6PEM8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Slc46a1Q6PEM8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc46a1Q6PEM8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc46a1Q6PEM8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a1Q6PEM8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a1Q6PEM8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Slc46a1Q6PEM8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a1Q6PEM8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.52■□□□□ 0.72
Slc46a1Q6PEM8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a1Q6PEM8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slc46a1Q6PEM8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Slc46a1Q6PEM8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.5■□□□□ 0.71
Slc46a1Q6PEM8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.5■□□□□ 0.71
Slc46a1Q6PEM8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc46a1Q6PEM8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 Gm5921-201ENSMUST00000075898 882 ntBASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a1Q6PEM8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a1Q6PEM8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a1Q6PEM8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a1Q6PEM8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Slc46a1Q6PEM8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a1Q6PEM8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a1Q6PEM8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a1Q6PEM8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a1Q6PEM8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a1Q6PEM8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a1Q6PEM8 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.45■□□□□ 0.7
Slc46a1Q6PEM8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Slc46a1Q6PEM8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc46a1Q6PEM8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a1Q6PEM8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a1Q6PEM8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc46a1Q6PEM8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc46a1Q6PEM8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Slc46a1Q6PEM8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a1Q6PEM8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a1Q6PEM8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc46a1Q6PEM8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc46a1Q6PEM8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.7
Slc46a1Q6PEM8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Slc46a1Q6PEM8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc46a1Q6PEM8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc46a1Q6PEM8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc46a1Q6PEM8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc46a1Q6PEM8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc46a1Q6PEM8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc46a1Q6PEM8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms